Job Description P39382 Confidence 98.27% Date Thu Jan 5 12:00:14 GMT 2012 Rank 125 Aligned Residues 211 % Identity 9% Template c2ojhA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1656/agr_c_3050; PDBTitle: the structure of putative tolb from agrobacterium tumefaciens Resolution 1.85 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	X	R	V	V	W	Q	T	P	E	L	F	E	A	P	N	W	S	P	D	G	K	Y	L	L	L	N	S	E	G	L	L	Y	R	L	S	L	A	G	D	P	S	P	E	K	V	D	T	G	F	A	T	I	C	N	N	D	H	G	I	S	P	D	G	A	L	Y	A	I	S	D	K	V	E	F	G	.	.	.	.
Template Known Secondary structure										S	S									T	T	S	S							T	T							S	S	S			S							T	T				B		S						T	T	S	S								T	T	T	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	S	A	I	Y	L	L	P	S	T	G	G	T	P	R	L	X	T	K	N	L	P	S	Y	W	H	G	W	S	P	D	G	K	S	F	T	Y	C	G	I	R	D	Q	V	F	D	I	Y	S	X	D	I	D	S	G	V	E	T	R	L	T	H	G	E	G	R	N	D	G	P	D	Y	S	P	D	G	R
Template Known Secondary structure		.	.	.	S								T	T									S	S	S	S								T	T	S	S									T	T									T	T	T									S	S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
																							194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	.	.	.	.	.	.	.	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	I	Y	F	N	S	S	R	T	G	Q	X	Q	I	W	R	V	R	V	D	G	S	S	V	E	R	I	T	D	S	A	Y	G	D	W	F	P	H	P	S	P	S	G	D	K	V	V	F	V	S	Y	D	A	D	V	F	D	H	P	R	D	L	D	V	R	V	Q	L	X	D	X	D	G	G	N	V	E	T	L	F
Template Known Secondary structure									T	T	S	S								T	T	S	S									S										T	T	S	S									T	T			S			S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	I	Y	I	V	S
Query Conservation																											.
Alig confidence									.	.	.	.	.	.													.
Template Conservation									.	.	.	.	.	.
Template Sequence		D	L	F	G	G	Q	G	.	.	.	.	.	.	T	X	N	S	P	N	W	S	P	D	G	D	E	F	A	Y	V	R
Template Known Secondary structure						S	T	T	.	.	.	.	.	.	T	S		S			B		T	T	S	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions