Job Description P39382 Confidence 99.58% Date Thu Jan 5 12:00:14 GMT 2012 Rank 41 Aligned Residues 219 % Identity 10% Template c2oajA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:protein sni1; PDBTitle: crystal structure of sro7 from s. cerevisiae Resolution 2.40 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E
Query Conservation
Alig confidence																																												.	.																.
Template Conservation																																												.	.																.
Template Sequence		G	M	S	S	K	P	I	A	A	A	F	D	F	T	Q	N	L	L	A	I	A	T	V	T	G	E	V	H	I	Y	G	Q	Q	Q	V	E	V	V	I	K	L	E	.	.	D	R	S	A	I	K	E	M	R	F	V	K	G	I	Y	.	L	V	V	I	N	A	K	D	T	V	Y	V	L	S	L	Y	S	Q	K	V
Template Known Secondary structure				S	S									T	T	T	T							T	T	S							S	T	T								S	.	.	S											T	T	T		.						T	T								T	T	T		S
Template Predicted Secondary structure																																												.	.																.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	.	S	G	A	E	F	N	Q
Query Conservation																																																																										.
Alig confidence										.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	T	V	F	V	P	G	.	.	.	.	.	.	.	.	.	.	K	I	T	S	I	D	T	D	A	S	L	D	W	M	L	I	G	L	Q	N	G	S	M	I	V	Y	D	I	D	R	D	Q	L	S	S	F	K	L	D	N	L	Q	K	S	S	F	F	P	A	A	R	L	S	P	I	V	S	I	Q	W	N	P
Template Known Secondary structure								S	S	.	.	.	.	.	.	.	.	.	.									T	T		S							T	T	S							T	T	T	T															T		S	S	S												T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																														.
Query SS confidence																																.	.	.	.	.	.	.	.	.																														.
Query Sequence		Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	.	.	.	.	.	.	.	.	.	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q
Query Conservation																																.	.	.	.	.	.	.	.	.																														.
Alig confidence																																.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		R	D	I	G	T	V	L	I	S	Y	E	Y	V	T	L	T	Y	S	L	V	E	N	E	I	K	Q	S	F	I	Y	E	L	P	P	F	A	P	G	G	D	F	S	E	K	T	N	E	K	R	T	P	K	V	I	Q	S	L	Y	H	P	N	S	L	H	I	I	T	I	H	E	D	N	S	L	V	F	W	D	A	N
Template Known Secondary structure		T										S	S							T	T	T	T										B		T	T				S	T	T				T	T	S		B											T	T	S	S							T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		284	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	H
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		302	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions