Job Description P39382 Confidence 99.42% Date Thu Jan 5 12:00:14 GMT 2012 Rank 59 Aligned Residues 220 % Identity 10% Template c2j57J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin. Resolution 2.25 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		H	A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	.	.	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y
Query Conservation																																			.	.
Alig confidence																																			.	.																							.	.
Template Conservation																																																											.	.
Template Sequence		D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	P	W	M	T	S	L	T	P	D	G	K	T	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	A	F	K	R	M	L	D	V	P	D	.	.	C	Y	H	I	F	P	T	A	P	D	T	F	F	M	H	C	R	D	G	S	L
Template Known Secondary structure						T	T							S			G	G	G					T	T	S									S	S	S								T	T	T	T										S	.	.									T	T							T	T	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	.	.	.	.	.	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																																																						.	.
Template Conservation																																																																																.	.
Template Sequence		A	K	V	A	F	G	T	E	G	T	P	E	I	T	H	T	E	V	F	H	P	E	D	E	F	L	I	N	H	P	A	Y	S	Q	K	A	G	R	L	V	W	P	T	Y	T	G	K	I	H	Q	I	D	L	S	S	G	D	A	K	F	L	P	A	V	E	A	L	T	E	A	E	R	A	D	G	W	R	P	.	.
Template Known Secondary structure								S	S	S	S										S		T	T	S		B		S						T	T	T	T						B	T	T	S								T	T	S	S									S	S							T	T				.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.										.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.									.
Query SS confidence																															.	.	.	.	.	.	.	.	.									.
Query Sequence		Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	.	.	.	.	.	.	A	L	Q	E	V	T	L	V	.	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N
Query Conservation																															.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.									.													.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	G	W	Q	Q	V	A	Y	H	R	A	L	D	R	I	Y	L	L	V	D	Q	R	D	E	W	R	H	K	T	A	S	R	F	V	V	V	L	D	A	K	T	G	E	R	L	A	K	F	E	M	G	H	E	.	.	.	.	.	.	.	.	.	.	I	D	S	I	N	V	S	Q	D	E	K
Template Known Secondary structure		.	.	.	.	.	.		S	S	S						T	T	T	T											T	T		T	T	S										T	T	T													.	.	.	.	.	.	.	.	.	.									S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.											.	.	.	.	.	.	.	340	.	.	.
				268	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.								.
Query SS confidence		.	.								.
Query Sequence		.	.	I	Y	I	V	S	E	P	.	N	R	F	Y	R	F	T	P	Q	S
Query Conservation		.	.								.
Alig confidence		.	.								.
Template Conservation
Template Sequence		P	L	L	Y	A	L	S	T	G	D	K	T	L	Y	I	H	D	A	E	S
Template Known Secondary structure									T	T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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