Job Description P39382 Confidence 83.36% Date Thu Jan 5 12:00:14 GMT 2012 Rank 185 Aligned Residues 204 % Identity 7% Template c2j04C_ PDB info PDB header:transcription Chain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic Resolution 3.2 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	.	.	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K
Query Conservation																																	.	.
Alig confidence																								.									.	.
Template Conservation																								.
Template Sequence		Y	P	R	V	C	K	P	S	P	I	D	D	W	M	A	V	L	S	N	N	G	N	.	V	S	V	F	K	D	N	K	M	L	T	N	L	D	S	K	G	N	L	S	S	R	T	Y	H	C	F	E	W	N	P	I	E	S	S	I	V	V	G	N	E	D	G	E	L	Q	F	F	S	I	R	K	N	S	E	N	T
Template Known Secondary structure										S	S	S	S							T	T	S		.					S	S	S	S								S	S		S	T	T	T									S	S	S	S							T	T	S											T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N
Query Conservation
Alig confidence																																														.	.	.	.	.	.																											.	.
Template Conservation																																														.	.	.	.	.	.																											.	.
Template Sequence		P	E	F	Y	F	E	S	S	I	R	L	S	D	A	G	S	K	D	W	V	T	H	I	V	W	Y	E	D	V	L	V	A	A	L	S	N	N	S	V	F	S	M	T	V	.	.	.	.	.	.	S	A	S	S	H	Q	P	V	S	R	M	I	Q	N	A	S	R	R	K	I	T	D	L	K	I	V	.	.	D	Y
Template Known Secondary structure													S		T	T												T	T							T	T									.	.	.	.	.	.		S	S	S	S												S	S									.	.	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.																											.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	.	.	.	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T
Query Conservation																																																				.	.	.
Alig confidence										.	.																							.	.	.	.	.	.	.	.											.	.	.
Template Conservation										.	.																							.	.	.	.	.	.	.	.
Template Sequence		K	V	V	L	T	C	P	G	.	.	Y	V	H	K	I	D	L	K	N	Y	S	I	S	S	L	K	T	G	S	L	E	N	.	.	.	.	.	.	.	.	F	H	I	I	P	L	N	H	E	K	E	S	T	I	L	L	M	S	N	K	T	S	Y	K	V	L	L	E
Template Known Secondary structure								S	S	.	.							T	T	T	T								S			S		.	.	.	.	.	.	.	.							T	T	S	S	S								S	S								S
Template Predicted Secondary structure										.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions