Job Description P39382 Confidence 99.48% Date Thu Jan 5 12:00:14 GMT 2012 Rank 53 Aligned Residues 226 % Identity 11% Template c2ismA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of the putative oxidoreductase (glucose2 dehydrogenase) (ttha0570) from thermus theromophilus hb8 Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.
Predicted Secondary structure																																																			.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.																.	.	.	.	.	.	.	.	.
Query Sequence		D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	.	.	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	.	.	.	.	.	.	.	.	.	Q	F	V	I	S
Query Conservation																																																			.	.																.	.	.	.	.	.	.	.	.
Alig confidence																								.																											.	.																.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		R	V	E	E	V	V	G	G	L	E	V	P	W	A	L	A	F	L	P	D	G	G	.	M	L	I	A	E	R	P	G	R	I	R	L	F	R	E	G	R	L	S	T	Y	A	E	L	S	V	Y	H	R	G	E	S	G	L	L	G	L	A	L	H	P	R	F	P	Q	E	P	Y	V	Y	A	Y	R	T	V	A	E
Template Known Secondary structure											S									T	T	S		.						T	T	T							T	T													S	T	T		S								T	T	T	T	T	S											T
Template Predicted Secondary structure																								.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.														.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	P	I	E	V	Y	K	V	N	G	L	L
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	L	R	N	Q	V	V	R	L	R	H	L	G	E	R	G	V	L	D	R	V	V	L	D	G	I	P	A	R	P	H	G	L	H	S	G	G	R	I	A	F	G	P	D	G	M	L	Y	V	T	T	G	E	V	Y	E	R	E	L	A	Q	D	L	A	S	L	G	G	K	I	L	R	L	T	P	E	G	E	P
Template Known Secondary structure		T	S	S											S	S																T	T												T	T	S									T	T		G	G	G	G	G		T	T		S	S	S							T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	.	.	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	G	N	P	F	L	G	R	R	G	A	R	P	E	V	Y	S	L	G	H	R	N	P	Q	G	L	A	W	H	P	K	T	G	E	L	F	S	S	E	H	G	P	G	H	D	E	V	N	L	I	V	P	G	G	N	Y	G	W	P	R	V	V	G	R	G	N	D	P	R	Y	R	D	P	L	Y	F	W	P	Q
Template Known Secondary structure			T	T		T	T	T	T		T	T	S		T	T							S									T	T	T																				T	T		B			T	T	T			S					T	T	S				S				T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
												225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	.	.	.	.	.	.	.	.	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N
Query Conservation		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	P	P	G	N	L	A	F	F	R	G	D	L	Y	V	A	G	L	R	G	Q	A	L	L	R	L	V	L	E	G	E	R	G	R	W	R	V	L	R	V	E	T	A	L	S	G	F	G	R	L	R	E	V	Q	V	G	P	D	G	A	L	Y	V	T	T	S	N	R
Template Known Secondary structure												T	T							T	T	T	T											T	T													S	S										T	T	S								S	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions