Job Description P39382 Confidence 39.90% Date Thu Jan 5 12:00:14 GMT 2012 Rank 193 Aligned Residues 169 % Identity 11% Template c2hz6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:endoplasmic reticulum to nucleus signalling 1 PDBTitle: the crystal structure of human ire1-alpha luminal domain Resolution 3.10 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		E	T	L	L	F	V	S	T	L	D	G	S	L	H	A	V	S	K	R	T	G	S	I	K	W	T	L	K	E	D	P	V	L	Q	V	P	P	A	.	.	.	.	.	.	.	.	F	L	P	D	P	N	D	G	S	L	Y	T	L	E	G	L	T	K	L	P	F	T	I	P	E	L	V	Q	A	S	P	C	R	L
Template Known Secondary structure		T	T							T	T	S							T	T	T												S							.	.	.	.	.	.	.	.					T	T	T									S				S								T	T		S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	.	H	E	S	R	A
Query Conservation																																																																												.
Alig confidence														.	.																																																													.
Template Conservation														.	.
Template Sequence		Y	M	G	K	K	Q	D	I	W	Y	V	I	.	.	D	L	L	L	Y	L	G	R	T	E	Y	T	I	T	M	Y	D	T	K	T	R	E	L	R	W	N	A	T	Y	F	D	Y	A	A	S	L	P	E	D	D	V	D	Y	K	M	S	H	F	V	S	N	G	D	G	L	V	V	T	V	D	S	E	S	G	D	V
Template Known Secondary structure														.	.																		S	S	S	S	S													B						T	T										T	S								T	T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	I	Q	N	Y	A	S	P	V	V	A	F	Y	V	W	Q	R	E	G
Template Known Secondary structure								S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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