Job Description P39382 Confidence 80.73% Date Thu Jan 5 12:00:14 GMT 2012 Rank 186 Aligned Residues 220 % Identity 13% Template c2cn2C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:beta-1,4-xyloglucan hydrolase; PDBTitle: crystal structures of clostridium thermocellum2 xyloglucanase Resolution 2.1 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																	.																															.	.	.	.	.	.														.
Query SS confidence																	.																															.	.	.	.	.	.														.
Query Sequence		I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	.	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	.	.	.	.	.	.	D	F	V	K	D	L	E	T	I	E	Y	I	G	.	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I
Query Conservation																	.																															.	.	.	.	.	.														.
Alig confidence																	.														.																	.	.	.	.	.	.														.
Template Conservation																															.
Template Sequence		I	G	G	G	G	G	F	X	P	G	I	V	F	N	E	T	E	K	D	L	I	Y	A	R	A	D	I	G	G	.	A	Y	R	W	D	P	S	T	E	T	W	I	P	L	L	D	H	F	Q	X	D	E	Y	S	Y	Y	G	V	E	S	I	A	T	D	P	V	D	P	N	R	V	Y	I	V	A	G	X	Y	T	N
Template Known Secondary structure				S	B		S									S	S	S	T	T							S	S	S		.						T	T	T	T							T	T			G	G	G	G	G	G	G									S	S		T	T								S		S	S
Template Predicted Secondary structure																															.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
										125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																						.
Query SS confidence		.	.	.	.	.	.	.	.																																						.
Query Sequence		.	.	.	.	.	.	.	.	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	.	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E
Query Conservation		.	.	.	.	.	.	.	.																																						.
Alig confidence		.	.	.	.	.	.	.	.																																						.																								.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		D	W	L	P	N	X	G	A	I	L	R	S	T	D	R	G	E	T	W	E	K	T	I	L	P	F	K	X	G	G	N	X	P	G	R	S	X	G	E	R	L	A	I	D	P	N	D	N	R	I	L	Y	L	G	T	R	C	G	N	G	L	W	R	S	T	D	Y	G	V	.	.	.	.	.	T	W	S	K	V	E
Template Known Secondary structure		S	S	S										S	S	T	T	S	S							S	S				T	T	S	T	T	T	T	S								S	S		T	T							S	T	T							S	S	T	T	S	.	.	.	.	.	S					T
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	.	.	.	.	.	.	.	.	.	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		S	F	P	N	P	G	T	I	I	G	V	V	W	V	V	F	D	K	S	S	S	T	P	G	N	P	T	K	T	I	Y	V	G	V	A	D	K	N	E	S	I	Y	R	S	T	D	G	G	V	T	W	K	A	V	P	G	Q	P	K	G	L	L	.	.	.	.	.	.	.	.	P	H	H	G	V	L	A	S	N	G
Template Known Secondary structure		T																	G	G	G	S		T	T	S			S							S		S	S							S	S	T	T	S	S					T	T				S	S		.	.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270
		267	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		N	I	Y	I	V	S	E	.	.	P	N	R	F	Y	R	F	T	P	Q	S	S	H
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		X	L	Y	I	T	Y	G	D	G	K	G	Q	V	W	K	F	N	T	R	T	G	E
Template Known Secondary structure																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions