Job Description P39382 Confidence 68.48% Date Thu Jan 5 12:00:14 GMT 2012 Rank 187 Aligned Residues 187 % Identity 11% Template c2be1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: structure of the compact lumenal domain of yeast ire1 Resolution 2.98 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	.	.	.	.	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		D	I	L	I	A	A	D	V	E	G	G	L	H	A	V	D	R	R	N	G	H	I	I	W	S	I	E	P	E	N	F	Q	P	L	I	E	I	Q	E	P	S	R	L	E	T	Y	E	T	L	I	I	E	P	F	G	D	G	N	I	Y	Y	F	N	A	H	Q	G	L	Q	K	L	P	L	S	I	R	Q	L	V	S
Template Known Secondary structure									T	T	S							T	T	T	T								G	G	G	S			S						S		T	T	T	S	S								S	T	T	T							T	T	T														T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S
Query Conservation
Alig confidence						.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	P	L	.	.	.	.	.	.	.	H	L	K	T	N	E	D	E	K	V	Y	T	G	S	M	R	T	I	M	Y	T	I	N	M	L	N	G	E	I	I	S	A	F	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	N	G	E	N	M	I	V	I	G	K	T	I
Template Known Secondary structure		T		S		.	.	.	.	.	.	.																								T	T	T								S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure						.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																				.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		F	E	L	G	I	H	S	Y	D	G	A	S	Y	N	V	T	Y	S	T	W	Q	Q	N	V	L	D	V	P	L	A	L	Q	N	T	F	S	K	.	.	D	G	M	C	I	A	P	F	R	D	K	S	L	L	A	S	D	L	D	F
Template Known Secondary structure									T	T	S														T	T	T					T	T		S	S		S	.	.	S	S							T	T	T							S	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions