Job Description P39382 Confidence 96.64% Date Thu Jan 5 12:00:14 GMT 2012 Rank 162 Aligned Residues 216 % Identity 10% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.
Predicted Secondary structure																														.	.	.	.	.																																						.	.	.	.	.
Query SS confidence																														.	.	.	.	.																																						.	.	.	.	.
Query Sequence		I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	.	.	.	.	.	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	.	.	.	.	.	D	E	R	D	Y
Query Conservation																														.	.	.	.	.																																						.	.	.	.	.
Alig confidence																														.	.	.	.	.																	.	.																				.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		P	N	T	W	A	T	A	L	D	A	W	A	A	S	D	D	G	R	L	L	A	Y	S	V	Q	D	G	G	S	D	W	R	T	V	K	F	V	G	V	A	D	G	K	P	L	A	D	E	L	.	.	K	W	V	K	F	S	G	L	A	W	L	G	N	D	A	L	L	Y	S	R	F	A	E	P	L	N	Y	N	Q
Template Known Secondary structure		G	G	G												T	T	S	S									T	T		S									T	T	T									.	.					S						S	T	T	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		T	V	W	L	H	R	L	G	T	P	Q	S	A	D	Q	P	V	F	.	.	.	.	.	A	T	P	E	L	P	K	R	G	H	G	A	S	V	S	S	D	G	R	W	V	V	I	T	S	S	E	G	T	D	P	V	N	T	V	H	V	A	R	V	T	N	G	K	I	G	P	V	T	A	L	I	P	D	L	K	A
Template Known Secondary structure								T	T	S		G	G	G						.	.	.	.	.			T	T		T	T									T	T	S										T	T		S											T	T											S	S	S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.		.	.	.
Predicted Secondary structure																						.	.	.																																																			.			.
Query SS confidence																						.	.	.																																																			.			.
Query Sequence		L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	.	.	.	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	.	E	P	.	N	R	F
Query Conservation																						.	.	.																																																			.			.
Alig confidence				.	.	.	.															.	.	.																												.	.	.	.	.	.																		.			.
Template Conservation				.	.	.	.																																													.	.	.	.	.	.
Template Sequence		Q	W	.	.	.	.	D	F	V	D	G	V	G	D	Q	L	W	F	V	S	G	D	G	A	P	L	K	K	I	V	R	V	D	L	S	G	S	T	P	R	F	D	T	V	V	P	E	S	K	D	.	.	.	.	.	.	N	L	E	S	V	G	I	A	G	N	R	L	F	A	S	Y	I	H	D	A	K	S	Q	V
Template Known Secondary structure				.	.	.	.							T	T								T	T		T	T									S	S	S	S											S	S	.	.	.	.	.	.									B	T									T	T
Template Predicted Secondary structure				.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
		319	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	F	T	P	Q	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	F	D	L	D	G	K
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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