Job Description P39382 Confidence 99.63% Date Thu Jan 5 12:00:14 GMT 2012 Rank 37 Aligned Residues 196 % Identity 10% Template c1qniE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution Resolution 2.40 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																				.																										.											.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																										.											.	.	.	.	.	.	.	.	.
Query Sequence		I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	.	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	.	N	Q	F	V	I	S	D	E	R	D	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																										.											.	.	.	.	.	.	.	.	.
Alig confidence																																				.																										.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	C	H	H	P	H	I	S	M	T	D	G	R	Y	D	G	K	Y	L	F	I	N	D	K	A	N	T	R	V	A	R	I	R	L	D	I	M	K	T	D	K	I	T	H	I	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	K	T	N	Y	V	F	C	N	A	E	F	V	I	P	Q	P	N	D	G
Template Known Secondary structure				B									T	T												T	T	T	T							T	T	T	T									T	T												S	S	B										S				S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
											122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	F	S	L	D	N	S	Y	T	M	F	T	A	I	D	A	E	T	M	D	V	A	W	Q	V	I	V	D	G	.	.	.	.	.	.	.	.	.	.	N	L	D	N	T	D	A	D	Y	T	G	K	Y	A	T	S	T	C	Y	N	S	E	R	.	.	.	.	.	.	.	.	.	.	A	V	D	L	A	G	T
Template Known Secondary structure		S				G	G	G										T	T	T										S	S	.	.	.	.	.	.	.	.	.	.									S	S	S	S							S		T	T		.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.											.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																														.	.																																.
Query SS confidence																																														.	.																																.
Query Sequence		K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	.	.	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	I	Y
Query Conservation																																														.	.																																.
Alig confidence																														.	.	.														.	.										.	.	.	.	.	.	.	.	.	.													.
Template Conservation																														.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	N	D	R	D	W	V	V	V	F	N	V	E	R	I	A	A	A	V	K	A	G	N	F	K	T	I	.	.	.	G	D	S	K	V	P	V	V	D	G	R	G	E	S	E	F	T	R	Y	I	P	V	P	K	.	.	.	.	.	.	.	.	.	.	N	P	H	G	L	N	T	S	P	D	G	K	Y	F	I
Template Known Secondary structure		T		S	S																		T	T			B			.	.	.	T	T									S	S	S		S	S								S	.	.	.	.	.	.	.	.	.	.	S								T	T	S
Template Predicted Secondary structure																														.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.											.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		270	.	.	.	.		.	.	.	.	.	280	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		I	V	S	E	P	.	N	R	F	Y	R	F	T
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		A	N	G	K	L	S	P	T	V	S	V	I	A
Template Known Secondary structure					T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions