Job Description P39382 Confidence 99.30% Date Thu Jan 5 12:00:14 GMT 2012 Rank 67 Aligned Residues 214 % Identity 12% Template c1pi6A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:actin interacting protein 1; PDBTitle: yeast actin interacting protein 1 (aip1), orthorhombic crystal form Resolution 2.50 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																				.	.
Query SS confidence																																						.	.	.	.																				.	.
Query Sequence		I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	.	.	.	.	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	.	.	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L
Query Conservation																																						.	.	.	.																				.	.
Alig confidence																									.													.	.	.	.																				.	.
Template Conservation																									.
Template Sequence		Q	R	N	F	T	T	H	L	S	Y	D	P	T	T	N	A	I	A	Y	P	C	G	K	.	S	A	F	V	R	C	L	D	D	G	D	S	K	V	P	P	V	V	Q	F	T	G	H	G	S	S	V	V	T	T	V	K	F	S	P	I	K	G	S	Q	Y	L	C	S	G	D	E	S	G	K	V	I	V	W	G	W
Template Known Secondary structure		B	T	T	B								T	T	T	T							T	T	.										S			S	S		S						T	T	T	T	S									S	S	T	T									T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	.	.	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S
Query Conservation																																										.	.
Alig confidence																	.																									.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	D	K	E	S	N	S	V	E	V	N	V	K	S	.	E	F	Q	V	L	A	G	P	I	S	D	I	S	W	D	F	E	G	R	R	L	C	V	V	G	E	G	R	D	N	F	G	V	F	I	S	W	D	S	G	N	S	L	G	E	V	S	G	H	S	Q	.	.	.	.	.	.	.	.	.	.	R	I	N
Template Known Secondary structure					T	T	T	T									.						S	S									T	T	S										S	S		S						S	S	S			B		B				S		S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	.	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S	S
Query Conservation																																																														.	.
Alig confidence																																														.	.	.	.	.												.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		A	C	H	L	K	Q	S	R	P	M	R	S	M	T	V	G	D	D	G	S	V	V	F	Y	Q	G	P	P	F	K	F	S	A	S	D	R	T	H	H	K	Q	G	S	F	.	.	.	.	.	V	R	D	V	E	F	S	P	D	S	G	E	F	V	I	T	V	G	S	D	R	K	I	S	C	F	D	G	K	S	G
Template Known Secondary structure							S	S	S	S								B	T	T							T	T	T	B								S	S	S		T	T		B	.	.	.	.	.								S	T	T									T	T								T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		286
Predicted Secondary structure
Query SS confidence
Query Sequence		H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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