Job Description P39382 Confidence 96.07% Date Thu Jan 5 12:00:14 GMT 2012 Rank 165 Aligned Residues 224 % Identity 10% Template c1p22A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:f-box/wd-repeat protein 1a; PDBTitle: structure of a beta-trcp1-skp1-beta-catenin complex:2 destruction motif binding and lysine specificity on the3 scfbeta-trcp1 ubiquitin ligase Resolution 2.95 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N
Query Conservation
Alig confidence															.	.																													.													.	.
Template Conservation															.	.																													.													.	.
Template Sequence		R	S	E	T	S	K	G	V	Y	C	L	Q	Y	.	.	D	D	Q	K	I	V	S	G	L	R	D	N	T	I	K	I	W	D	K	N	T	L	E	C	K	R	I	L	.	T	G	H	T	G	S	V	L	C	L	Q	Y	.	.	D	E	R	V	I	I	T	G	S	S	D	S	T	V	R	V	W	D	V	N	T	G
Template Known Secondary structure				S	S										.	.		S	S							S	S	S							S	S	S								.				S	S								.	.		S	S							T	T	S							S	S	S
Template Predicted Secondary structure															.	.																													.													.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	L	N	T	L	I	H	H	C	E	A	V	L	H	L	R	F	N	N	G	M	M	V	T	C	S	K	D	R	S	I	A	V	W	D	M	A	S	P	T	D	I	T	L	R	R	V	L	V	G	H	R	A	A	V	N	V	V	D	F	D	D	K	Y	I	V	S	A	S	G	D	R	T	I	K	V	W	N	T
Template Known Secondary structure												S									T	T							T	T	S								S	S	S	S												S	S									T	T							T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.								.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.								.
Query Sequence		Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	.	.	.	.	.	.	.	.	.	A	M	D	A	S	G	N	.	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T
Query Conservation																																																		.	.	.	.	.	.	.	.	.								.
Alig confidence																																																		.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		S	T	C	E	F	V	R	T	L	N	G	H	K	R	G	I	A	C	L	Q	Y	R	D	R	L	V	V	S	G	S	S	D	N	T	I	R	L	W	D	I	E	C	G	A	C	L	R	V	L	E	G	H	E	E	L	V	R	C	I	R	F	D	N	K	R	I	V	S	G	A	Y	D	G	K	I	K	V	W	D
Template Known Secondary structure		T	T											S	S									T	T							T	T	S							T	T	T											S	S									S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions