Job Description P39382 Confidence 97.37% Date Thu Jan 5 12:00:14 GMT 2012 Rank 153 Aligned Residues 216 % Identity 9% Template c1nexD_ PDB info PDB header:ligase, cell cycle Chain: D: PDB Molecule:cdc4 protein; PDBTitle: crystal structure of scskp1-sccdc4-cpd peptide complex Resolution 2.70 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P
Query Conservation
Alig confidence												.																																		.																	.
Template Conservation												.																																		.																	.
Template Sequence		T	L	R	G	H	X	T	S	V	I	.	T	C	L	Q	F	E	D	N	Y	V	I	T	G	A	D	D	K	X	I	R	V	Y	D	S	I	N	K	K	F	L	L	Q	L	.	S	G	H	D	G	G	V	W	A	L	K	Y	A	H	G	G	.	I	L	V	S	G	S	T	D	R	T	V	R	V	W	D	I	K	K
Template Known Secondary structure							S	S	S			.							T	T							T	T	T							T	T	T	T							.				S	S									T	T	T	.							T	T	S							T	T	T
Template Predicted Secondary structure												.																																		.																	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		G	C	C	T	H	V	F	E	G	H	N	S	T	V	.	.	.	.	.	.	.	R	C	L	D	I	V	E	Y	K	N	I	K	Y	I	V	T	G	S	R	D	N	T	L	H	V	W	K	L	P	K	D	Y	P	L	V	F	H	T	P	E	E	N	P	Y	F	V	G	V	L	R	G	H	X	A	S	V	R	T	V
Template Known Secondary structure		T										S	S			.	.	.	.	.	.	.									T	T									T	T	S																S		T	T	T		T	T									S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.								.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S	S	H
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	G	H	G	N	I	V	V	S	G	S	Y	D	N	T	L	I	V	W	D	V	A	Q	X	K	C	L	Y	I	L	S	G	H	T	D	R	.	.	.	.	.	.	.	.	.	I	Y	S	T	I	Y	D	H	E	R	K	R	C	I	S	A	S	X	D	T	T	I	R	I	W	D	L	E	N	G
Template Known Secondary structure					T	T							T	T	S							T	T	T	T										S	S		.	.	.	.	.	.	.	.	.								T	T	T	T							T	T	S							T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.										.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions