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Job DescriptionP39382
Confidence99.27%DateThu Jan 5 12:00:14 GMT 2012
Rank68Aligned Residues212
% Identity10%Templatec1k32E_
PDB info PDB header:hydrolaseChain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110....... ..120
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Query Sequence  KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVIS. . . . . . . . . . DER
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Template Sequence  EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER. SREAMITDFTISDNSRFIAYGFPLKHGETDGYV
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   398.400.........410.........420.........430.........440... ......450.........460.........470......
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  DYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQ
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Template Sequence  MQAIHVYDMEGRKIF. . . . . . . . . . AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP
Template Known Secondary structure  TTTT..........
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SSSB
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SSSS


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BSST
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   477..480.........490. ........500.........510.........520.........530.........540......
 
   201... .....210.........220. ........230.....
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Query Sequence  FTLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DVSGAEFNQQKNTLLVL. . . . . . . . . . . . . SHESRALQEVTLVG
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Template Sequence  GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT
Template Known Secondary structure  T


GGG


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TTGGGG

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   547..550.........560.........570.........580.........590.........600.........610.........620......
 
   236...240.........250.........260....... ..270.........280.....
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Query Sequence  EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN. IYIVSEPNRFYRFTPQSS
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Template Sequence  RKVTEVKNN. . . . . . . . . . . . LTDLRLSADRKTVMVRKDDGKIYTFPLEKP
Template Known Secondary structure  T............
TTS
TTS
TT
T
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   627..630..... ....640.........650.........660.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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