Job Description P39382 Confidence 99.56% Date Thu Jan 5 12:00:14 GMT 2012 Rank 46 Aligned Residues 199 % Identity 5% Template c1fwxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans Resolution 1.60 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																			.																												.												.	.	.	.	.	.	.
Query SS confidence																																			.																												.												.	.	.	.	.	.	.
Query Sequence		A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	.	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	.	F	V	I	S	D	E	R	D	Y	A	I	.	.	.	.	.	.	.
Query Conservation																																			.																												.												.	.	.	.	.	.	.
Alig confidence																																			.																												.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	H	H	V	H	M	S	F	T	E	G	K	Y	D	G	R	F	L	F	M	N	D	K	A	N	T	R	V	A	R	V	R	C	D	V	M	K	C	D	A	I	L	E	I	P	N	A	K	G	I	H	G	L	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N	G	E	D	E	T	P	L	V	N	D	G	T
Template Known Secondary structure			B									T	T												T	T	T	T							T	T	T	T									S	S			S									S	S	B		S								S				S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
														125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		N	M	E	D	V	A	N	Y	V	N	V	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	L	V	S	G	.	.	.	.	.	.	.	.	.	.	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	K	.	.	.	.	.	.	.	.	.	.	G	M	T	L	P	E	M
Template Known Secondary structure		S	T	T		G	G	G										T	T	T	T									S	S	.	.	.	.	.	.	.	.	.	.									S	S	S	S							S		T	T		.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270
Predicted Secondary structure																																													.																																	.
Query SS confidence																																													.																																	.
Query Sequence		K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	.	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	I	Y	I
Query Conservation																																													.																																	.
Alig confidence																										.	.																		.												.	.	.	.	.	.	.	.	.	.												.
Template Conservation																										.	.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	A	E	M	D	H	I	V	V	F	N	I	A	E	I	E	K	A	I	A	A	G	D	.	.	Y	Q	E	L	N	G	V	K	V	V	D	G	R	K	E	A	S	S	L	F	T	R	Y	I	P	I	A	N	N	.	.	.	.	.	.	.	.	.	.	P	H	G	C	N	M	A	P	D	K	K	H	L	C	V
Template Known Secondary structure		T		S	S																		T	T		.	.	S				T	T							S	G	G	G			S	S								S	S	.	.	.	.	.	.	.	.	.	.								T	T	S	S
Template Predicted Secondary structure																										.	.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		271	.	.	.		.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	S	E	P	.	N	R	F	Y	R	F	T	P	Q	S
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	G	K	L	S	P	T	V	T	V	L	D	V	T	R
Template Known Secondary structure				T	T	S	S	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions