Job Description P0AAM7 Confidence 9.40% Date Thu Jan 5 11:13:19 GMT 2012 Rank 99 Aligned Residues 44 % Identity 25% Template c2zkra_ PDB info PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																.	.	.													.	.	.
Query SS confidence																.	.	.													.	.	.
Query Sequence		G	V	P	G	Q	V	L	A	V	G	E	D	I	H	.	.	.	Q	L	A	Q	V	E	V	C	G	I	K	R	.	.	.	D	V	N	I	A	L	I	C	E	G	N	P	A	D	L	L	G	Q	W	V	L
Query Conservation																.	.	.													.	.	.
Alig confidence																.	.	.													.	.	.										.	.	.
Template Conservation																																											.	.	.
Template Sequence		Y	I	K	G	I	V	K	D	I	I	H	D	P	G	R	G	A	P	L	A	K	V	V	F	R	D	P	Y	R	F	K	K	R	T	E	L	F	I	A	A	E	.	.	.	G	I	H	T	G	Q	F	V	Y
Template Known Secondary structure														T	T	T	T									S	S			S	S	S	S	S							B	S	.	.	.	S			T	T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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