Job Description P0AAM7 Confidence 29.11% Date Thu Jan 5 11:13:19 GMT 2012 Rank 30 Aligned Residues 42 % Identity 19% Template c2xzm1_ PDB info PDB header:ribosome Chain: 1: PDB Molecule:ribosomal protein s28e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	P	G	Q	V	L	A	V	G	E	D	I	H	Q	L	A	Q	V	E	V	C	G	I	K	R	D	V	N	I	A	L	I	C	.	.	.	.	.	.	.	.	.	.	E	G	N	P	A	D	L	L	G	Q	W	V	L	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		T	T	K	A	R	I	M	D	V	.	.	.	.	.	.	L	G	K	T	G	S	R	G	G	I	T	Q	V	R	V	V	L	I	S	G	K	E	E	G	R	Q	L	I	R	N	V	K	G	A	C	R	V	G	D	V	L	E	L
Template Known Secondary structure											.	.	.	.	.	.																			S	S	S			S									S				T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions