Job Description P0A877 Confidence 90.03% Date Thu Jan 5 11:07:06 GMT 2012 Rank 465 Aligned Residues 215 % Identity 13% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	.	F
Query Conservation																																																																																.
Alig confidence																							.	.	.	.	.																	.	.	.	.	.	.	.	.																					.	.	.						.
Template Conservation																							.	.	.	.	.																	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	D	.	.	.	.	.	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	.	.	.	.	.	.	.	.	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I	K	G	H	.	.	.	Y	L	N	A	T	A	G
Template Known Secondary structure																T	T		S	B			.	.	.	.	.		T	T		S	S	B	T	T	B							.	.	.	.	.	.	.	.															S	S			B		.	.	.							S
Template Predicted Secondary structure																							.	.	.	.	.																	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.									.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.
		108	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure					.																							.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																							.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	G	.	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	.	.	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	.	.	.	.	.	.	.	.	.	.	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T
Query Conservation					.																							.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence					.																							.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	C	E	D	M	M	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L	R	L	S	G	G	D	H
Template Known Secondary structure		S															T		S																									T								T	T						S		S	S	S	S																S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	.	A	G	A	A	G	A	I	S	G
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.											.
Template Conservation									.	.																																																			.
Template Sequence		I	H	S	G	T	V	V	.	.	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	Y	T	E	K	D	R	S	R	G	I	Y	F	T	Q	S	W	V	S	T	P	G	V	L	P	V	A	S	G	G	I	.	H	V	W	H	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F
Template Known Secondary structure							S	S	.	.	S	S	S																	S					B	G	G	G	T	B		S					T	T										S	S		.		G	G	G										S	S	S
Template Predicted Secondary structure									.	.																																																			.
Template SS confidence
		326	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A
Query Conservation
Alig confidence							.	.	.
Template Conservation							.	.	.
Template Sequence		G	G	G	T	L	.	.	.	G	H	P	W	G	N	A	P	G	A	V	A	N	R	V	A	L	E	A	C	V	Q	A
Template Known Secondary structure		S					.	.	.	T	S	T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		403	.	.	.	.				.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions