Job Description P0A877 Confidence 98.46% Date Thu Jan 5 11:07:06 GMT 2012 Rank 164 Aligned Residues 172 % Identity 21% Template d1twda_ SCOP info TIM beta/alpha-barrel CutC-like CutC-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	.	N	L	V	F	N	K	G	I
Query Conservation																																																																									.
Alig confidence																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.						.	.												.											.
Template Conservation																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.						.	.												.
Template Sequence		S	X	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	.	.	.	.	C	A	A	P	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	P	S	.	.	L	G	V	L	K	S	V	R	Q	R	V	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D
Template Known Secondary structure		S										T	T		S					.	.	.	.		B		G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.		B				.	.												.		S					B			S	S	S	S		S
Template Predicted Secondary structure																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.						.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.														.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		112	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																					.	.	.												.								.	.	.
Query SS confidence					.	.	.	.	.	.																					.	.	.												.								.	.	.
Query Sequence		D	E	F	.	.	.	.	.	.	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	.	.	.	E	S	A	P	F	R	Q	A	A	L	R	.	H	N	V	A	P	I	F	.	.	.	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S
Query Conservation					.	.	.	.	.	.																					.	.	.												.								.	.	.
Alig confidence					.	.	.	.	.	.																					.	.	.												.								.	.	.																									.	.
Template Conservation																																																																																.	.
Template Sequence		G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	X	P	R	X	E	K	I	X	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	X	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	.	.
Template Known Secondary structure																	T	T		S							B		T	T	S	S	B													T	T	S						G	G	G	G	G		S													T							.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A
Query Conservation
Alig confidence		.	.	.	.																																	.
Template Conservation		.	.	.	.																																	.
Template Sequence		.	.	.	.	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	X	E	L	I	A	H	R	D	A	P	I	I	X	A	G	A	G	V	.	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V
Template Known Secondary structure		.	.	.	.		T	T	S	S	S	T	T	T	T									T	S	S	S								S	S		.		T	T	T								T		S
Template Predicted Secondary structure		.	.	.	.																																	.
Template SS confidence
						148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions