Job Description P0A877 Confidence 96.88% Date Thu Jan 5 11:07:06 GMT 2012 Rank 310 Aligned Residues 123 % Identity 15% Template d1ttja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.	170	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	.	.	.	.	.	.	.	.	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	L	R	Q	I	A	S	Y	G	R
Query Conservation																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																											.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		A	D	A	L	A	S	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	I	A	C	I	G	.	E	T	L	Q	E	R	E	S	G	R	T	A	V	V	V	L	T	Q	I	A	A	I	A	K	K	L	K
Template Known Secondary structure											T	T							S								S																	T	T									.								T	T															T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		172							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence			.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		G	.	.	.	.	.	.	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	.	.	.	.	.	.	.	.	.	.	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	.	A	G	A	A	G	A	I	S	G
Query Conservation			.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.																							.
Alig confidence			.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.												.											.
Template Conservation																																																													.
Template Sequence		K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	R	S	W	V	S	S	K	I	G	A	D	V	A	G	E	L	R	I	L	Y	G	G	S	V	.	N	G	K	N	A	R	T	L	Y	Q	Q	R	D	V	N	G	F	L	V	G
Template Known Secondary structure		G	G	G	G	G	G								G	G	G	T	T	T	S																							T														S	S		.		T	T	T						T	S	T	T							S
Template Predicted Secondary structure																																																													.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		235	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		235	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions