|   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | G | I | E | Q | S | L | K | I | I | D | T | L | I | E | A | G | A | D | A | L | E | L | G | I | P | F | S | D | P | L | A | D | G | P | T | I | Q | N | A | T | L | R | A | F | A | A | G | V | T | P | A | Q | C | F | E | M | L | A | L | I | R | Q | K | H | P | T | I | P | I | G | L | L | M | Y | A | N | L | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | X | A | X | E | D | X | V | G | A | C | A | D | I | D | A | A | G | Y | W | S | V | E | C | W | G | G | A | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | D | S | C | I | R | F | L | N | E | D | P | W | E | R | L | R | T | F | R | K | L | X | P | N | S | R | L | Q | X | L | L | R | G | Q | N | L |
Template Known Secondary structure |   |
|
|
| G | G | G | T | G | G | G |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
| G | G | G | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
107 | . | . | 110 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | N | K | G | . |
. |
. |
. |
. |
. |
I | D | E | F | Y | A | Q | C | E | K | V | G | V | D | S | V | L | V | . |
. |
A | D | V | P | V | E | E | S | A | P | F | R | Q | A | A | L | R | H | N | V | A | P | I | F | I | C | P | P | N | A | . |
. |
. |
. |
. |
. |
. |
. |
D | D | D | L | L | R | Q | I | A | S | Y | G |
Query Conservation |   |
  |   |   |
| . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
| . | . |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |
| . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | G | Y | R | H | Y | N | D | E | V | V | D | R | F | V | D | K | S | A | E | N | G | X | D | V | F | R | V | F | D | A | X | N | D | P | R | N | X | A | H | A | X | A | A | V | K | K | A | G | K | H | A | Q | G | T | I | C | Y | T | I | S | P | V | H | T | V | E | G | Y | V | K | L | A | G | Q | L | L | D | X | G |
Template Known Secondary structure |   |
T | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
|
| S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
. | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | Y | T | Y | L | L | S | R | A | G | V | T | G | A | E | N | R | A | A | L | P | L | N | H | L | V | A | K | L | K | E | Y | N | . |
. |
A | A | P | P | L | Q | . |
. |
. |
. |
G | F | G | I | S | A | P | D | Q | V | K | A | A | I | D | A | G | A | A | G | A |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . |   |   |
|
|   |
| . | . | . | . |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
| . | . | . | . | . | . |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
| . |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|
Template Sequence |   |
A | D | S | I | A | L | . |
. |
. |
. |
. |
. |
D | X | A | A | L | L | K | P | Q | P | A | Y | D | I | I | K | A | I | K | D | T | Y | G | Q | K | T | Q | I | N | L | H | C | H | S | T | T | G | V | . |
T | E | V | S | L | X | K | A | I | E | A | G | V | D | V | V |
Template Known Secondary structure |   |
| S |  |  |  |
| . | . | . | . | . | . |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |
|
| B |
| T | T | S |
| . |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |