Job Description P0A877 Confidence 99.94% Date Thu Jan 5 11:07:06 GMT 2012 Rank 15 Aligned Residues 209 % Identity 14% Template d1rpxa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	.	.	.	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R
Query Conservation																																										.	.	.
Alig confidence																		.	.																							.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	S	D	I	I	V	S	P	S	I	L	S	A	N	F	.	.	S	K	L	G	E	Q	V	K	A	I	E	Q	A	G	C	D	W	I	H	V	D	V	M	D	G	R	F	V	P	N	I	T	I	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	D	S	L	R
Template Known Secondary structure			T	T	S						B	G	G	G	S		G	.	.	G	G											T	T										B	S	S	S	S	S		B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G
Template Predicted Secondary structure																		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																					.	.	60	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	.	.	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A
Query Conservation																																										.	.
Alig confidence			.															.	.	.	.	.																				.	.
Template Conservation			.															.	.	.	.	.
Template Sequence		P	.	I	T	D	L	P	L	D	V	H	L	M	I	V	E	.	.	.	.	.	P	D	Q	R	V	P	D	F	I	K	A	G	A	D	I	V	S	V	H	C	E	Q	S	S	T	I	H	L	H	R	T	I	N	Q	I	K	S	L	G	A	K	A	G	V	V	L	N	P	G	T	P	L	T	A	I	E	Y	V	L
Template Known Secondary structure		G	.	G			S								S	S	S	.	.	.	.	.											T	T		S							S	T	T	T		S												T	T	S								T	T			G	G	G	G	T	T	T	T
Template Predicted Secondary structure			.															.	.	.	.	.
Template SS confidence
		65		.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	.	.	.	.	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E
Query Conservation																																							.	.	.	.	.
Alig confidence																					.	.																	.	.	.	.	.											.																								.	.	.	.
Template Conservation																					.	.																																.																								.	.	.	.
Template Sequence		D	A	V	D	L	V	L	I	M	S	V	N	P	G	F	G	G	Q	S	.	.	F	I	E	S	Q	V	K	K	I	S	D	L	R	K	I	C	A	E	R	G	L	N	P	W	I	E	V	D	G	G	V	.	G	P	K	N	A	Y	K	V	I	E	A	G	A	N	A	L	V	A	G	S	A	V	F	.	.	.	.
Template Known Secondary structure		T	T		S						S	S		T	T		S	S			.	.			T	T																T									S	S		.		T	T	T								T							S					.	.	.	.
Template Predicted Secondary structure																					.	.																																.																								.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	A	P	D	Y	A	E	A	I	K	G	I	K	T
Template Known Secondary structure		.	T	S	S											T
Template Predicted Secondary structure		.
Template SS confidence
			212	.	.	.	.	.	.	.	220	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions