Job Description P0A877 Confidence 97.75% Date Thu Jan 5 11:07:06 GMT 2012 Rank 230 Aligned Residues 137 % Identity 13% Template d1aw1a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																			.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	.	.	.	.	.	.	.	.	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	Q	I	A	S
Query Conservation																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																											.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.
Template Sequence		P	A	M	L	K	E	F	G	A	T	H	I	I	I	G	H	S	E	R	R	E	Y	H	A	E	S	D	E	F	V	A	K	K	F	A	F	L	K	E	N	G	L	T	P	V	L	C	I	G	.	E	S	D	A	Q	N	E	A	G	E	T	M	A	V	C	A	R	Q	L	D	A	V	I	N	T	Q	G	V	E	A
Template Known Secondary structure						G	G	G	T							S								S																		T									.								T	T																			G	G	G
Template Predicted Secondary structure																																																			.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																							.
Query SS confidence																																					.	.	.	.	.	.	.	.	.																							.
Query Sequence		Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	.	.	.	.	.	.	.	.	.	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	.	A	G	A	A	G	A	I	S	G	S	A	I	V
Query Conservation																																					.	.	.	.	.	.	.	.	.																							.
Alig confidence																																					.	.	.	.	.	.	.	.	.												.											.
Template Conservation																																																									.
Template Sequence		L	E	G	A	I	I	A	Y	E	P	I	W	A	I	G	T	G	K	A	A	T	A	E	D	A	Q	R	I	H	A	Q	I	R	A	H	I	A	E	K	S	E	A	V	A	K	N	V	V	I	Q	Y	G	G	S	V	.	K	P	E	N	A	A	A	Y	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	A	L
Template Known Secondary structure		G	T	T								G	G	G	T	T	T	S																					T	T														S			.		T	T	T						T	S	T	T							S	G	G	G	G
Template Predicted Secondary structure																																																									.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	A	K	S	F	A	A	I	A	K	A	A	A	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions