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Job DescriptionP0A877
Confidence96.71%DateThu Jan 5 11:07:06 GMT 2012
Rank320Aligned Residues205
% Identity18%Templatec3si9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70....... ..80.........90. ......
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Query Sequence  GDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVT. . . . . . . PAQCFEMLALIRQK. HPTIPI
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Template Sequence  GAIDEKAFCNFVEWQITQGINGVSPV. . . . . . . . . . . . . . . . . . . . . . . GTTGESPTLTHEEHKRIIELCVEQVAKRVPV
Template Known Secondary structure  S
B
TT
S
S.......................STTTTGGG

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B
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   21........30.........40...... ...50.........60.........70.......
 
   98.100.........110.........120.........130... ......140.........150....... ..160......
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Query Sequence  GLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPV. . . . . . EESAPFRQAALRHNVAPIFICPPN. . . . . ADDDLLRQI
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Template Sequence  VAGAGSNST. . SEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDL
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SS..TT
S


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   78.80...... ...90.........100.........110.........120.........130.........140.........150.....
 
   167..170.........180.........190.........200.........210.........220.........230...... ...240
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Query Sequence  ASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSA. . . . . . IVKI
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Template Sequence  CRDFKNIIGVKDATGK. . . . . . . . . . . IERASEQREKCGKDFVQLSG. . DDCTALGFNAHGGVGCISVSSNVAPKLCAQL
Template Known Secondary structure 
TT
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   156...160.........170. ........180.........190. ........200.........210.........220..
 
   241........250.........260........
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Query Sequence  IEQHINEPEKMLAALKVFVQPMKAATRS
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Template Sequence  HAACLCSDYKTALKLNDLLMPLNRAVFI
Template Known Secondary structure  TT
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   223......230.........240.........250
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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