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Job DescriptionP0A877
Confidence95.57%DateThu Jan 5 11:07:06 GMT 2012
Rank371Aligned Residues148
% Identity16%Templatec3rr1B_
PDB info PDB header:lyaseChain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  RKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHP
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Template Sequence  LVRDKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDT. . . . . . . . . . . . . SRAVDAAVARVAEIRSAF.
Template Known Secondary structure 
S
S


SSTTT

SSSSSS
B
S.............TT.
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   109110.........120.........130.........140.........150...... ...160.........170....
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  TIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGY
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Template Sequence  GNTVEFGLDFHGR. . . . . . . . . . . . . . . . . . . . . . . . VSAPMAKVLIKELEPYRPLFI. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGS
TT
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GGG

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   175....180....... ..190.........200........
 
   174.....180.........190.........200.........210.........220....... ..230...
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Query Sequence  TYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAG. AAGAIS
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Template Sequence  . . . . . . . . . . . . EEPVLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQP
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S


SSSTT
SS

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S

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   209210.........220.........230.........240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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