Job Description P0A877 Confidence 96.49% Date Thu Jan 5 11:07:06 GMT 2012 Rank 332 Aligned Residues 225 % Identity 16% Template c3qw3B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:orotidine-5-phosphate decarboxylase/orotate PDBTitle: structure of leishmania donovani omp decarboxylase Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.
Query Sequence		M	E	R	Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	.	.	.	.	.	.	.	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A
Query Conservation																																.	.	.	.	.	.	.
Alig confidence																	.	.	.						.	.	.					.	.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.						.	.	.																									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	F	F	D	L	L	N	E	R	A	K	R	S	L	.	.	.	L	C	V	G	L	.	.	.	D	P	R	A	K	T	A	A	A	A	V	E	E	C	K	R	L	I	E	Q	T	H	E	Y	.	A	A	A	Y	K	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	F
Template Known Secondary structure													T	T			.	.	.						.	.	.					S	S																G	G	G	.		S					B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.						.	.	.																									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.																			.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	.	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F
Query Conservation																																															.
Alig confidence																																			.												.
Template Conservation																																			.
Template Sequence		E	F	F	G	A	E	G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V	V	L	D	A	K	R	G	D	I	.	A	D	T	A	D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	G	S	D	S	L	Q	P	F	M	R	Y	P	D	K	A	V	F	V	L	C
Template Known Secondary structure			T	T	T													T	S		T	T			B										.													T	T	S			S							T	T										T		T	T	S
Template Predicted Secondary structure																																			.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		153	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.		.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																																.									.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																																.									.
Query Sequence		I	C	P	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	A	A	P	P	L	Q	G	F	.	G	I	S	A	P
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																																.									.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.											.									.
Template Conservation																																																.	.	.	.	.	.	.	.	.
Template Sequence		K	T	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G	P	W	N	V	N	G	N	V	G	L	V	V	G	A	T	D	P	.	.	.	.	.	.	.	.	.	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	S	L	K
Template Known Secondary structure					T	T						T		B		S	S	S	B										T	T	T	T		T	T	S								T	T			.	.	.	.	.	.	.	.	.											S	S	S							T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		218	.	220	.	.	.	.		.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure									.									.
Query SS confidence									.									.
Query Sequence		D	Q	V	K	A	A	I	.	D	A	G	A	A	G	A	I	.	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A
Query Conservation									.									.
Alig confidence									.									.							.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		A	S	L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	.	.	.	.	.	R	A	A	D	P	R	A	A	A	K	E	L	C	E	E	I	N	A	I	R	F	A
Template Known Secondary structure										T	T	S								S					.	.	.	.	.	T		S	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions