Job Description P0A877 Confidence 97.78% Date Thu Jan 5 11:07:06 GMT 2012 Rank 226 Aligned Residues 207 % Identity 18% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		21	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																																			.
Query SS confidence										.	.	.																																																			.
Query Sequence		P	F	V	T	L	G	D	P	.	.	.	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	.	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P
Query Conservation										.	.	.																																																			.
Alig confidence								.		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.															.
Template Conservation								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		F	T	I	I	A	G	.	P	S	V	E	G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	K	L	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	.	G	M	Y
Template Known Secondary structure								.																			T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															T	.	T
Template Predicted Secondary structure								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		95	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.					170	.
Predicted Secondary structure																																																															.													.	.	.	.
Query SS confidence																																																															.													.	.	.	.
Query Sequence		I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	.	A	D	D	D	L	L	R	Q	I	A	S	Y	.	.	.	.	G	R
Query Conservation																																																															.													.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.											.													.																							.													.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.											.													.
Template Sequence		V	V	T	E	A	L	G	.	.	.	.	.	.	.	.	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	.	N	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	G	G	G								.		S						G	G	G	T	T	.									G	G	G		S								T	T																T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.											.													.
Template SS confidence
		161	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		172	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure								.	.																																			.	.	.	.						.	.
Query SS confidence								.	.																																			.	.	.	.						.	.
Query Sequence		G	Y	T	Y	L	L	.	.	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	.	.	.	.	F	G	I	S	A	.	.	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q
Query Conservation								.	.																																			.	.	.	.						.	.
Alig confidence								.	.														.	.	.																			.	.	.	.						.	.																						.	.
Template Conservation																							.	.	.																																																			.	.
Template Sequence		K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	.	.	.	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H	P	.	.	E	P	E	K
Template Known Secondary structure										B			S		S	S	S	S	S	B			.	.	.	T	T									B	S	S						T	T	T	T	T			G	G	G												T		S						B		S	.	.		T	T	T
Template Predicted Secondary structure																							.	.	.																																																			.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.
		244	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		H	I	N	E	P	E	K	M	.	.	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T	R
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		A	L	S	D	G	K	Q	S	L	D	F	E	L	F	K	E	L	V	Q	E	M	K	K	L	A	D
Template Known Secondary structure			S	S	S	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions