Job Description P0A877 Confidence 99.63% Date Thu Jan 5 11:07:06 GMT 2012 Rank 48 Aligned Residues 203 % Identity 12% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		E	R	K	E	G	A	F	V	P	F	V	T	L	G	.	.	.	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R
Query Conservation																.	.	.
Alig confidence																.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	E	Q	F	D	Y	S	L	Y	L	V	T	D	S	G	M	I	P	E	G	K	T	L	Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K
Template Known Secondary structure			G	G	G				S							S	T	T			T	T												S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S		T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure			.	.																																							.	.
Query SS confidence			.	.																																							.	.
Query Sequence		Q	.	.	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q
Query Conservation			.	.																																							.	.
Alig confidence			.	.										.	.	.	.	.	.	.	.	.	.	.	.																		.	.													.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		E	L	C	H	A	H	N	V	P	L	I	I	.	.	.	.	.	.	.	.	.	.	.	.	N	D	R	I	D	V	A	M	A	I	G	A	D	G	I	H	V	G	Q	D	D	M	P	I	P	M	I	R	K	L	V	.	.	.	.	.	.	G	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L
Template Known Secondary structure							T	T						.	.	.	.	.	.	.	.	.	.	.	.		S									T		S						T	T	S	S										.	.	.	.	.	.		T	T	S								S	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.
Predicted Secondary structure																																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	.	.	.	.	.	.	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	.	.	.	.	.	.	.	.	D	A	G	A	A	G	A
Query Conservation																																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.												.										.	.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		S	K	M	G	P	D	M	V	D	Y	I	G	V	G	T	L	F	P	T	L	T	K	K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H	W	C	R	T	V	G	I	G	G	L	.	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I
Template Known Secondary structure			T	T		T	T	S										S			S	S																					T	T		T	T							S	S		.		T	T	T									B		T	T	S			B		S
Template Predicted Secondary structure																																																									.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		C	V	V	S	D	I	I	.	.	.	.	.	A	S	L	D	A	A	K	S	T	K	I	L	R	G	L	I	D
Template Known Secondary structure				S	T	T	T	T	.	.	.	.	.	T		T	T													T
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions