Job Description P0A877 Confidence 96.97% Date Thu Jan 5 11:07:06 GMT 2012 Rank 305 Aligned Residues 196 % Identity 17% Template c3n2xB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate Resolution 2.20 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																					.	.															.
Query SS confidence																																																					.	.															.
Query Sequence		G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	.	K	H	P	T	I	P	I	G	L	L	M	Y
Query Conservation																																																					.	.															.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.															.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G
Template Known Secondary structure		S		B															T	T		S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.					.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																												.				.	.	.	.													.														.	.	.	.	.
Query SS confidence																												.				.	.	.	.													.														.	.	.	.	.
Query Sequence		A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	A	D	V	.	.	.	.	P	V	E	E	S	A	P	F	R	Q	A	A	.	L	R	H	N	V	A	P	I	F	I	C	P	P	.	.	.	.	.	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R
Query Conservation																												.				.	.	.	.													.														.	.	.	.	.
Alig confidence								.	.																			.				.	.	.	.													.														.	.	.	.	.
Template Conservation								.	.
Template Sequence		G	T	N	A	R	E	.	.	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S
Template Known Secondary structure		S	S					.	.												T		S								S	S	S																	T		S	S												S	S															T
Template Predicted Secondary structure								.	.
Template SS confidence
		91	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																													.	.	.																								.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																													.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		N	I	I	G	I	.	.	.	.	.	.	.	.	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	.	.	.	Y	D	D	H	L	F	N	T	L	L	L	G	G	D	G	A	I	S	A	S	G	N	F	.	.	.	.	.	.	.	.	A	P	Q	V	S
Template Known Secondary structure		T					.	.	.	.	.	.	.	.				S																	T	T		B				S	.	.	.	S	G	G	G							T	T							G	G	G	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																													.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.
		252	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	L	K	V	F	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	L	L	K	A	W	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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