Job Description P0A877 Confidence 90.73% Date Thu Jan 5 11:07:06 GMT 2012 Rank 455 Aligned Residues 212 % Identity 13% Template c3lotC_ PDB info PDB header:structure genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (np_070038.1) from2 archaeoglobus fulgidus at 1.89 a resolution Resolution 1.89 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																									.	.					.				.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																									.	.					.				.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		T	P	D	Q	I	V	E	E	A	V	K	A	A	E	A	G	A	G	X	V	H	I	H	.	.	A	R	D	P	.	K	D	G	.	.	.	.	.	.	.	.	.	.	.	R	P	T	T	D	V	E	V	F	R	Y	I	C	R	E	I	K	K	Q	S	.	D	V	V	I	N	V	T	T	G	G	G	G	T	L	G
Template Known Secondary structure		S														T	T		S						.	.				T	.	T	T		.	.	.	.	.	.	.	.	.	.	.																					.								S	S	T	T	G	G	G	T
Template Predicted Secondary structure																									.	.					.				.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.		.	.	.												.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																																				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	V	E	E	R	A	K	V	V	P	A	L	K	P	E	I	A	T	F	N	X	G	S	X	N	F	A	I	H	P	L	L	K	K	Y	K	E	F	K	Y	D	W	E	P	E	Y	L	E	X	T	R	D	I	V	F	R	N	T	F	K	D	L	E	A	L	S	R	I	F	K	E	N	D	T	K	P	E	L	E
Template Known Secondary structure								T	T								S														G	G	G	G	G	T					S	S	T									G	G	G																				T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																				.	.	.	.
Query SS confidence																					.	.																																				.	.	.	.
Query Sequence		C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	.	.	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	.	.	.	.	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G
Query Conservation																					.	.																																				.	.	.	.
Alig confidence																					.	.																																				.	.	.	.
Template Conservation
Template Sequence		C	Y	D	I	G	Q	I	Y	N	T	A	F	X	F	H	E	G	Y	L	E	P	P	L	R	L	Q	F	I	H	G	I	L	G	G	I	G	T	A	V	E	D	V	L	F	X	K	Q	T	A	D	R	L	I	G	R	E	N	Y	T	W	S	L	V	G	A	G	R	F	Q	X	P	L	G	T	L	A	V	I	X	G
Template Known Secondary structure			S	S													T	T	S	S		S	S										T	T	S																			T		G	G	G									G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	.	.	.	.	.	.	.	.	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence				.					.	.	.	.	.	.					.	.	.	.	.	.	.	.
Template Conservation				.					.	.	.	.	.	.
Template Sequence		G	D	.	V	R	V	G	.	.	.	.	.	.	L	E	D	S	L	Y	I	E	R	G	K	L	A	K	S	N	A	E	Q	V	E	K	X	V	R	I	V	K	E	L
Template Known Secondary structure				.				S	.	.	.	.	.	.	T	T	T		S				T	T				S																T
Template Predicted Secondary structure				.					.	.	.	.	.	.
Template SS confidence
		254	.		.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions