Job Description P0A877 Confidence 97.37% Date Thu Jan 5 11:07:06 GMT 2012 Rank 273 Aligned Residues 217 % Identity 14% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																														.	.																	.	.
Query SS confidence																																																														.	.																	.	.
Query Sequence		G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	.	.
Query Conservation																																																														.	.																	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	I	T	P	F	K	N	G	K	V	D	E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G
Template Known Secondary structure										T	T																T	T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	G	G	G	S																	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.					.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.
Predicted Secondary structure																																						.				.	.	.	.													.														.	.	.	.	.
Query SS confidence																																						.				.	.	.	.													.														.	.	.	.	.
Query Sequence		P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	A	D	V	.	.	.	.	P	V	E	E	S	A	P	F	R	Q	A	A	.	L	R	H	N	V	A	P	I	F	I	C	P	P	.	.	.	.	.	N	A	D	D	D
Query Conservation																																						.				.	.	.	.													.														.	.	.	.	.
Alig confidence																.	.																					.				.	.	.	.													.														.	.	.	.	.
Template Conservation																.	.
Template Sequence		T	K	V	K	V	L	A	G	A	G	S	N	A	T	.	.	H	E	A	V	G	L	A	K	F	A	K	E	H	G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D
Template Known Secondary structure		S	S										S	S		.	.													T	T		S									S	S																			S	S												S
Template Predicted Secondary structure																.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		T	I	I	K	L	F	R	D	C	E	N	I	Y	G	V	E	A	S	G	N	.	.	.	.	.	.	.	.	.	.	.	.	I	D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	.	.	.	E	D	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	N	L	L	P	D
Template Known Secondary structure											T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.												T	T	S	B					.	.	.		G	G	G							T	T							S	G	G	G	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
			237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T	R	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		X	I	S	A	L	T	H	F	A	L	D	E	N	Y	K	E	A	K	K	I	N	D	E	L	Y	N	I	N	K	I	L	F	C
Template Known Secondary structure												T	T												T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions