Job Description P0A877 Confidence 96.96% Date Thu Jan 5 11:07:06 GMT 2012 Rank 306 Aligned Residues 204 % Identity 18% Template c3lciA_ PDB info PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w Resolution 2.12 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																					.	.																		.
Query SS confidence																																																					.	.																		.
Query Sequence		G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	.	T	I	P	I	G	L	L	M	Y
Query Conservation																																																					.	.																		.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																		.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G
Template Known Secondary structure		S		B															T	T		S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																												.	.			.	.	.																	.	.											.	.	.	.	.
Query SS confidence																												.	.			.	.	.																	.	.											.	.	.	.	.
Query Sequence		A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	.	.	.	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	.	.	N	V	A	P	I	F	I	C	P	P	.	.	.	.	.	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G
Query Conservation																												.	.			.	.	.																	.	.											.	.	.	.	.
Alig confidence								.	.																			.	.			.	.	.																	.	.											.	.	.	.	.													.
Template Conservation								.	.																																																																							.
Template Sequence		C	V	S	T	A	E	.	.	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	.	L
Template Known Secondary structure			S	S				.	.												T		S									S	S																		T	T	T																										T	.	S
Template Predicted Secondary structure								.	.																																																																							.
Template SS confidence
		82	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.										.	.	.	240	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.
Query Sequence		R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	.	.	.	I	V	K	I	I
Query Conservation																																																																				.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																										.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		P	G	V	G	A	L	.	.	.	.	.	.	.	.	.	.	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	.	.	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.																		T	T							.	.	.	.		G	G	G								T							T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		159	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		242	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		E	Q	H	I	.	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		K	E	G	D	I	Q	T	A	Q	K	L	Q	T	E	C	N	K	V	I	D	L	L	I	K
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions