Job Description P0A877 Confidence 95.67% Date Thu Jan 5 11:07:06 GMT 2012 Rank 366 Aligned Residues 159 % Identity 11% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																									.	.	.	.	.	.	.													.	.	.	.	.	.	.	.															.											.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.													.	.	.	.	.	.	.	.															.											.	.	.	.	.
Template Sequence		K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	.	.	.	.	.	.	X	D	D	G	L	L	D	A	R	T	E	X	.	.	.	.	.	.	.	.	T	T	F	L	N	L	I	X	S	E	P	E	I	A	.	R	V	P	V	X	I	D	S	S	K	.	.	.	.	.
Template Known Secondary structure																T	T		S						.	.	.	.	.	.	.				T	T	S							.	.	.	.	.	.	.	.									T						.	T	S							S		.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.													.	.	.	.	.	.	.	.															.											.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.								.	400	.	.	.	.	.	.	.	.	.	410									.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.							.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.							.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	I	D	E	F	Y	A	Q	C	E	K	.	.	V	G	V	D	S	V	.	.	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	.	.	.	.	.	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.							.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.										.	.							.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F
Template Known Secondary structure		.	.	.												S	S									S	T	T																T							S			T	T					S																			T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.
Predicted Secondary structure																								.	.	.	.														.
Query SS confidence																								.	.	.	.														.
Query Sequence		G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	.	.	.	.	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	A	A	P	P	L	Q	G
Query Conservation																								.	.	.	.														.
Alig confidence																								.	.	.	.														.
Template Conservation
Template Sequence		N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G
Template Known Secondary structure			G	G	G											S	S	S		G	G	G	T	T																S	T	T						B
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions