Job Description P0A877 Confidence 98.86% Date Thu Jan 5 11:07:06 GMT 2012 Rank 129 Aligned Residues 171 % Identity 17% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	.	.	.	.	.	.	.
Template Known Secondary structure																	T		S							G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S			S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																						.	.					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	V	P	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	.	.	.	.	.	.	D	D	D	L	L	R	Q	I	A	S
Query Conservation																						.	.					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence																						.	.					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K
Template Known Secondary structure			S											T	T		S								G	G	G																										T	T								T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	.	.	.	.	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G
Query Conservation																																														.	.	.	.
Alig confidence										.	.	.	.	.																																.	.	.	.			.
Template Conservation										.	.	.	.	.																																						.
Template Sequence		I	G	V	N	R	V	G	I	.	.	.	.	.	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	.	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I	D	T	S
Template Known Secondary structure					S					.	.	.	.	.			S	S	S																			S	S							B		T	T	S		.												T							B
Template Predicted Secondary structure										.	.	.	.	.																																						.
Template SS confidence
		187	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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