Job Description P0A877 Confidence 94.53% Date Thu Jan 5 11:07:06 GMT 2012 Rank 398 Aligned Residues 229 % Identity 15% Template c3ijdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: uncharacterized protein cthe_2304 from clostridium2 thermocellum binds two copies of 5-methyl-5,6,7,8-3 tetrahydrofolic acid Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																													.	.	.	.	.																.	.	.	.
Query SS confidence																													.	.	.	.	.																.	.	.	.
Query Sequence		E	R	Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	.	.	.	.	.	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	.	.	.	.	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F
Query Conservation																													.	.	.	.	.																.	.	.	.
Alig confidence									.	.	.	.													.	.			.	.	.	.	.																.	.	.	.						.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.													.	.																																.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	L	K	Q	K	I	.	.	.	.	L	N	R	E	S	G	I	I	T	Y	G	I	.	.	T	P	P	K	K	N	N	T	E	E	K	I	K	E	I	S	Q	K	H	I	E	R	I	S	G	L	D	I	D	G	L	.	V	I	Y	D	L	Q	I	E	T	I	D	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.		T	T		S								.	.				B	S	S	S																		T				S			.									B				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.													.	.																																.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.					.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	Q	I	Y	S	E	N	Y	L	K	D	L	K	I	P	K	I	I	Y	R	C	V	G	K	.	Y	T	P	D	E	F	R	R	L	T	R	P	V	S	G	Q	D	A	F	S	V	F	V	G	A	A	V	L	L	K	L	S	D	A	Y	K	I	R	Q	D	V	N	P	D	L	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T	S		S								G	G	G	.	S										S			T	T														S														T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																								.
Template SS confidence
											76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		153	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.		.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																																		.	.	.	.	.	.										.
Query SS confidence					.	.	.	.	.	.																																																		.	.	.	.	.	.										.
Query Sequence		I	C	P	.	.	.	.	.	.	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	.	.	.	.	.	A	A	P	P	L	Q	G	F	G	.	I	S	A	P	D	Q
Query Conservation					.	.	.	.	.	.																																																		.	.	.	.	.	.										.
Alig confidence					.	.	.	.	.	.																													.	.	.	.	.	.																.	.	.	.	.	.										.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		G	G	V	A	I	P	E	R	H	M	K	N	T	D	E	H	L	R	I	I	D	K	I	N	K	G	C	K	Y	F	I	T	Q	A	V	Y	N	.	.	.	.	.	.	V	E	A	A	K	D	F	L	S	D	Y	Y	Y	Y	S	K	N	N	N	L	K	M	V	P	I	I	F	T	L	T	P	C	G	S	T	K	T
Template Known Secondary structure														S												T	T							S					.	.	.	.	.	.																		T	T															S
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T	R
Query Conservation
Alig confidence						.		.	.
Template Conservation						.		.	.
Template Sequence		L	E	F	M	.	K	.	.	W	L	G	I	S	I	P	R	W	L	E	N	D	L	M	N	C	E	D	I	L	N	K	S	V	S	L	S	K	S	I	F	N	E	L	M	E	F	C	L
Template Known Secondary structure						.		.	.			T													T	T
Template Predicted Secondary structure						.		.	.
Template SS confidence
		225	.	.	.		.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions