Job Description P0A877 Confidence 96.64% Date Thu Jan 5 11:07:06 GMT 2012 Rank 324 Aligned Residues 175 % Identity 15% Template c3hpxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644) Resolution 2.03 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	A	R	K	R	R	M	F	D	L	L	V	R	M	G	Y	K	E	I	E	V	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	P
Template Known Secondary structure																	T		S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T														T	T		S		T	T									S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.															.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	.	.	.	.	.	.	.	.	.	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L
Query Conservation																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	T	E	L	E	Y	A
Template Known Secondary structure											T	T	T		S																		T	T																									S	T	T	S										T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.											.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																.	.	.	.									.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																.	.	.	.									.	.	.	.
Query Sequence		R	Q	I	A	S	Y	G	R	G	Y	.	.	.	.	.	.	.	.	.	.	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	.	.	.	A	A	P	P	L	Q	G	F	.	.	.	.	G	I	S	A	P	D	Q	V	K	A	A	I	D
Query Conservation												.	.	.	.	.	.	.	.	.	.																																.	.	.	.									.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.				.	.	.	.	.																								.	.	.	.									.	.	.	.			.
Template Conservation																									.	.	.	.	.																																										.
Template Sequence		K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	.	.	.	.	.	P	A	T	V	E	M	T	T	P	N	V	Y	A	D	S	I	E	W	M	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	.	A	V	A	A	A	E	L	G	F	A
Template Known Secondary structure																S	S	S							.	.	.	.	.			S	S			S																S	T	T	G	G	G								B		T	T	S		.
Template Predicted Secondary structure																									.	.	.	.	.																																										.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.
		226	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	A	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	D	R	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions