Job Description P0A877 Confidence 97.23% Date Thu Jan 5 11:07:06 GMT 2012 Rank 285 Aligned Residues 189 % Identity 19% Template c3fokH_ PDB info PDB header:structural genomics, unknown function Chain: H: PDB Molecule:uncharacterized protein cgl0159; PDBTitle: crystal structure of cgl0159 from corynebacterium2 glutamicum (brevibacterium flavum). northeast structural3 genomics target cgr115 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	.	.	.	.	.	.	Y	A
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.												.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		Y	E	L	L	E	R	X	A	I	A	L	S	R	P	G	V	D	G	V	L	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	I	I	D	D	L	A	A	L	.	.	G	L	L	D	D	K	I	V	V	G	S	X	N	R	G	G	L	R	G
Template Known Secondary structure														S	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	.	.	T			T	T											S		T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																												.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		104	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																		.	.	.	.	.							.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																		.	.	.	.	.							.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	V	F	N	K	.	.	.	.	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	.	.	.	.	.	L	V	A	D	V	P	.	.	.	.	.	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	.	.	.	.	.	.	.	.	.	.	I	C	P	P	N	A	D
Query Conservation								.	.	.	.																		.	.	.	.	.							.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.				.	.													.	.	.	.	.							.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		A	S	F	E	X	D	D	R	Y	T	G	Y	N	.	.	V	S	S	X	V	D	R	G	V	D	F	A	K	T	L	V	R	I	N	L	S	D	A	G	T	A	P	T	L	E	A	T	A	H	A	V	N	E	A	A	A	A	Q	L	P	I	X	L	E	P	F	X	S	N	W	V	N	G	K	V	V	N	D	L	S
Template Known Secondary structure			T	T	T	T	S					S			.	.								T												T	T		T	T																		T	T														T	T							S
Template Predicted Secondary structure															.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	.	.	.	.	.	K	A	A	I	D	A	G	A	A	G	A	I	S	G
Query Conservation																																																															.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		T	D	A	V	I	Q	S	V	A	I	A	.	.	.	.	.	.	.	A	G	L	G	N	D	S	S	Y	T	W	X	K	L	P	V	V	E	E	X	E	R	V	X	E	S	T	T	X	P	T	L	L	L	G	G	E	G	G	P	D	A	T	F	A	S	W	E	H	A	L	T	L	P	G	V	R	G	L	T	V	G
Template Known Secondary structure													.	.	.	.	.	.	.		T		S	S			S	S									T	T					G	G	G		S	S								S														T	T	S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		R	T	L	.	.	.	L	Y	P	Q	D	G	D	V	A	A	A	V	D	T	A	A	R	L	V
Template Known Secondary structure		T	T	T	.	.	.	S	S		S	S	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		274	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions