Job Description P0A877 Confidence 97.89% Date Thu Jan 5 11:07:06 GMT 2012 Rank 218 Aligned Residues 222 % Identity 17% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q
Query Conservation
Alig confidence								.														.	.						.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation								.														.	.						.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		M	V	T	V	P	K	.	L	Q	A	M	R	E	A	G	E	K	I	A	M	.	.	L	T	S	Y	D	.	.	.	.	.	.	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	.	.	.	.	.	.	.	.	.	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D
Template Known Secondary structure								.							T	T						.	.					S	.	.	.	.	.	.										T	T		S						.	.	.	.	.	.	.	.	.	T	T					T	T			S	S	S	T	T
Template Predicted Secondary structure								.														.	.						.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	.	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D
Query Conservation																				.
Alig confidence																				.																																		.	.
Template Conservation																																																						.	.
Template Sequence		I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	.	.	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A
Template Known Secondary structure												T			S	S								T	T	S		S	S														T	T		S								.	.	G	G	G										T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I
Query Conservation		.	.
Alig confidence		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A	.	.	.	.	.	.	.	.	.	.	.	G	A	E	C	S	G	Q	V	L	V	L	H	D
Template Known Secondary structure														T		S						S			.	.	.	.	.	.	.	.	.	.	.	.	.												S	S						S	S	.	.	.	.	.	.	.	.	.	.	.		S		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.														.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.												.	.	.	.	.	.	.	210	.	.	.	.	.
		238										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	G	V	F	P	G	K	R	P	R	F	V	K	D	F	M	Q	G	Q	P	S	I	F	A	A	V	E	A	Y	V	R	A	V	K	D	G	S
Template Known Secondary structure			T	T			S	S				T	T				S	S	T	T		S	S															T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions