Job Description P0A877 Confidence 96.68% Date Thu Jan 5 11:07:06 GMT 2012 Rank 322 Aligned Residues 204 % Identity 18% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.																	.
Query SS confidence																																																						.	.	.	.	.	.	.																	.
Query Sequence		G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	.	.	.	.	.	.	.	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	.	T	I	P	I
Query Conservation																																																						.	.	.	.	.	.	.																	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.																	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	V	R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V
Template Known Secondary structure		S		B															T	T		S		B	B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T	G	G	G																		T	T	S	S		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130				.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																	.	.			.	.	.														.															.	.	.	.	.
Query SS confidence																																	.	.			.	.	.														.															.	.	.	.	.
Query Sequence		G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	.	.	.	V	P	V	E	E	S	A	P	F	R	Q	A	A	.	L	R	H	N	V	A	P	I	F	I	C	P	P	N	.	.	.	.	.	A	D	D	D	L	L	R	Q	I
Query Conservation																																	.	.			.	.	.														.															.	.	.	.	.
Alig confidence													.	.																			.	.			.	.	.														.															.	.	.	.	.
Template Conservation													.	.
Template Sequence		V	A	G	V	A	S	T	S	V	A	D	.	.	A	V	A	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L
Template Known Secondary structure								S	S				.	.												T		S									S	S																			S	S								T	T	T		S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	I	V	K	I
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence				.														.	.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.	.	.
Template Conservation				.														.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		A	E	.	H	P	R	I	R	Y	I	K	D	A	S	T	N	.	.	.	.	.	.	.	.	.	.	.	T	G	R	L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S	A	.	.	S	A	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C	I	A	P	R	Q	S	V	A	L
Template Known Secondary structure			T	.	S	T	T								S	S		.	.	.	.	.	.	.	.	.	.	.												G	G	G	S						.	.	T	T	S								T	T							G	G	G	G	T
Template Predicted Secondary structure				.														.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		155	.		.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	L	C	K	A	Q	R	W	D	E	A	L	M	L	Q	R	K	L	W	R	V	N	E	A	F	A	K
Template Known Secondary structure							T	T													T							T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions