Job Description P0A877 Confidence 96.89% Date Thu Jan 5 11:07:06 GMT 2012 Rank 309 Aligned Residues 211 % Identity 14% Template c3daqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus Resolution 1.45 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																													.	.																			.
Query SS confidence																																																													.	.																			.
Query Sequence		A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	.
Query Conservation																																																													.	.																			.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																			.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	T	T	P	F	T	N	N	K	V	N	L	E	A	L	K	A	H	V	N	F	L	L	E	N	N	A	Q	A	I	I	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	A	E	S	P	T	L	T	T	D	E	K	E	L	I	L	K	T	V	I	D	L	V	D	K	R
Template Known Secondary structure									T	T																	T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	.	.	.	.	.	.	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	.	.	.	.	.	N	A	D	D	D	L	L
Query Conservation																																									.	.	.	.	.	.																								.	.	.	.	.
Alig confidence														.	.																										.	.	.	.	.	.																								.	.	.	.	.
Template Conservation														.	.
Template Sequence		V	P	V	I	A	G	T	G	T	N	D	T	.	.	E	K	S	I	Q	A	S	I	Q	A	K	A	L	G	A	D	A	I	M	L	I	T	P	Y	Y	N	K	T	N	Q	R	G	L	V	K	H	F	E	A	I	A	D	A	V	K	L	P	V	V	L	Y	N	V	P	S	R	T	N	M	T	I	E	P	E	T	V
Template Known Secondary structure		S									S			.	.														T		S									S	S																				S												S
Template Predicted Secondary structure														.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence						.															.	.	.	.	.	.	.	.	.	.	.																						.																						.	.	.	.	.	.	.
Template Conservation						.															.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		E	I	L	S	.	Q	H	P	Y	I	V	A	L	K	D	A	T	N	D	.	.	.	.	.	.	.	.	.	.	.	F	E	Y	L	E	E	V	K	K	R	I	D	T	N	S	F	A	L	Y	S	G	.	N	D	D	N	V	V	E	Y	Y	Q	R	G	G	Q	G	V	I	S	V	I	A	N	V	I	P	K	E	F
Template Known Secondary structure						.	T	S	T	T											.	.	.	.	.	.	.	.	.	.	.									T	T	S		T	T	T	S					S	.		G	G	G							T	T							S	G	G	G	T
Template Predicted Secondary structure						.															.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		151	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
				237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M
Query Conservation		.	.
Alig confidence		.	.									.
Template Conservation												.
Template Sequence		Q	A	L	Y	D	A	Q	Q	S	G	.	L	D	I	Q	D	Q	F	K	P	I	G	T	L	L	S	A	L
Template Known Secondary structure										T	T	.
Template Predicted Secondary structure												.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions