Job Description P0A877 Confidence 96.77% Date Thu Jan 5 11:07:06 GMT 2012 Rank 316 Aligned Residues 208 % Identity 12% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.
Predicted Secondary structure																																																					.	.																			.
Query SS confidence																																																					.	.																			.
Query Sequence		G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	.	I	P	I	G	L	L	M	Y
Query Conservation																																																					.	.																			.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																			.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	I	D	W	K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	G	E	F	Y	A	L	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R	A	T	V	V	A	G	I	G
Template Known Secondary structure				B															T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																												.	.						.	.	.	.
Query SS confidence																												.	.						.	.	.	.
Query Sequence		A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	V	P	V	.	.	.	.	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L
Query Conservation																												.	.						.	.	.	.
Alig confidence							.	.	.																			.	.						.	.	.	.
Template Conservation							.	.	.
Template Sequence		Y	S	V	D	T	.	.	.	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	F	K	D	A	H	L	S	D	D	V	I	K	E	L	A	P	L	D	K	L	V	G	I
Template Known Secondary structure		S	S				.	.	.											T	T		S										S																		S	S	S									T	T	S		T							T	T		T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		88	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.										.	.	.	240	.	.		.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.							.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.							.
Query Sequence		L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	.	.	.	I	V	K	I	I	E	.	Q	H	I	N
Query Conservation																																																														.	.	.	.	.	.	.	.	.							.
Alig confidence								.	.	.	.	.	.	.																								.	.	.																						.	.	.	.	.	.	.	.	.							.
Template Conservation								.	.	.	.	.	.	.																								.	.	.
Template Sequence		K	Y	A	I	N	D	.	.	.	.	.	.	.	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	T	.	.	.	A	E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L	V	N	V	F	P	Q	K	S	F	A	L	L	E	A	L	E	E	G	N	Q	E
Template Known Secondary structure								.	.	.	.	.	.	.											S		G	G	G							T	T	.	.	.												T							S	G	G	G	T															T
Template Predicted Secondary structure								.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		165	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	W	D	V	W	E	D	V	V	P	F	E	D	L	R	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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