Job Description P0A877 Confidence 99.74% Date Thu Jan 5 11:07:06 GMT 2012 Rank 37 Aligned Residues 216 % Identity 17% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E
Query Conservation
Alig confidence														.	.	.										.	.																								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.										.	.																								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	S	L	I	Q	Q	L	K	Q	Q	K	.	.	.	L	S	V	G	I	L	S	A	N	.	.	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	.	.	.	.	.	.	A	D	G	Q	F	S	S	L	F	T	V	G	.	.	.	.	.	.	.	.	.	.	.	A	I
Template Known Secondary structure										T	T			.	.	.					G	G	G	S		.	.	G	G	G											T	T									.	.	.	.	.	.		B	S	S	S	S	S		B		B		.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure														.	.	.										.	.																								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.												.	60
		84	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.
Predicted Secondary structure															.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence															.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		M	L	A	L	I	R	Q	K	H	P	T	I	P	.	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	.	.	.	.	.	.	.	.	.	H	N	V	A	P	I	F	I
Query Conservation															.																																																		.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.					.										.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.															.	.	.	.	.	.
Template Sequence		G	I	K	Y	F	P	.	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	.	.	.	.	.	.	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C
Template Known Secondary structure					T	S		.	.	.	T	T	S									S			.	.	.	.	.	.										T	T		S						T	T		T	T	S									T	T						T	T
Template Predicted Secondary structure								.	.	.															.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	.	.	.	.	.	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A
Query Conservation																																																				.	.	.	.	.
Alig confidence																															.	.																				.	.	.	.	.												.
Template Conservation																															.	.																																				.
Template Sequence		L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	I	D	V	I	Q	L	L	T	L	D	P	R	N	.	.	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	.	T	L	E	L	A	K	Y	F	K	Q	G	T	H
Template Known Secondary structure				T	T	S		G	G	G	G	T	T	T	T	T	T		S						S			T	T	T	.	.	T																				G	G	G	G	G	G							S	S		.											S	S	S
Template Predicted Secondary structure																															.	.																																				.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.
				229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T
Query Conservation		.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	D	W	L	V	S	G	S	A	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	K	T	N	L	K	V	W	K	S	S	I
Template Known Secondary structure										G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.														.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions