Job Description P0A877 Confidence 98.22% Date Thu Jan 5 11:07:06 GMT 2012 Rank 189 Aligned Residues 222 % Identity 14% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		R	Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	.	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C
Query Conservation																																													.
Alig confidence																.	.							.	.																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	N	E	I	L	L	K	A	H	K	E	G	Y	.	.	G	V	G	A	F	N	.	.	F	V	N	F	E	M	L	N	A	I	F	E	A	G	N	E	E	N	S	P	L	F	I	Q	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	I	K	Y	M	G	I	D	M	A
Template Known Secondary structure														T		.	.							.	.		S	S															T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																			50	.	.	.	.	.	.	.	.	.	60	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.
Predicted Secondary structure																																																	.	.							.	.	.	.															.	.	.	.
Query SS confidence																																																	.	.							.	.	.	.															.	.	.	.
Query Sequence		F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	.	.	A	D	V	P	V	E	.	.	.	.	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	.	.	.	.	A	P	I
Query Conservation																																																	.	.							.	.	.	.															.	.	.	.
Alig confidence																						.	.	.	.	.																							.	.							.	.	.	.															.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		V	G	M	V	K	I	M	C	E	R	Y	P	H	I	P	V	A	L	H	L	.	.	.	.	.	D	H	G	T	T	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A	E	L	G
Template Known Secondary structure												S	T	T	S							.	.	.	.	.					S											T		S							T	T	S																			T	T								S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	.	.	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	M	G	I	L	V	N	P	K	E	A	E	Q	F	V	K	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K	L	D	F	E	R	L	Q	E	V	K	R	L	T	N	I	P	L	V	L	H	G	A	S	A	I	P	D	N	V	R	K	S	Y	L	D	A	G	G
Template Known Secondary structure																							S						S	S			S	S	S	B			S	S	S																	S						S															T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
												218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	K	G	S	K	G	V	P	F	E	F	L	Q	E	S	V	K	G	G	I	N	K	V	N	T	D	T	D	L	.	.	.	.	.	.	.	.	.	.	R	I	A	F	I	A	E	V	R	K	V	A	N	E
Template Known Secondary structure				T	T		B														T											.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions