Job Description P0A877 Confidence 97.44% Date Thu Jan 5 11:07:06 GMT 2012 Rank 265 Aligned Residues 174 % Identity 16% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.											.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.											.	.	.	.	.
Template Sequence		N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	.	N	V	P	L	S	L	D	I	Q	N	.	.	.	.	.
Template Known Secondary structure																T	T		S							S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S																T	.		S									.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.											.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.																			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.				.
Predicted Secondary structure															.	.																																			.	.	.	.															.	.	.	.	.					.	.	.
Query SS confidence															.	.																																			.	.	.	.															.	.	.	.	.					.	.	.
Query Sequence		K	G	I	D	E	F	Y	A	Q	C	E	K	V	.	.	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	.	.	.	.	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	.	.	.	.	.	G	R	G	Y	.	.	.	T
Query Conservation															.	.																																			.	.	.	.															.	.	.	.	.					.	.	.
Alig confidence		.	.	.											.	.																																			.	.	.	.															.	.	.	.	.					.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	D	L	T	E	R	A	L	R	A	Y	P	G	R	S	L	F	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V
Template Known Secondary structure		.	.	.												S	S									S																							S		S	S	S				S																		T	T		T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	.	.	.	.	.	.	.	.	.	.	.	V	K	A	A	I	D	A	G	A	A	G	A	I	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.															.								.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.															.								.	.
Template Sequence		I	F	D	P	G	V	L	P	L	G	A	E	G	K	.	P	V	E	V	L	K	T	I	E	F	I	S	S	K	.	G	F	N	T	T	V	G	.	.	L	S	N	L	S	F	L	P	D	R	S	Y	Y	N	T	A	F	L	V	L	G	I	S	K	G	L	S	S	A	I	M
Template Known Secondary structure										G	G	G	T			.														T	.	T			B			B	.	.	G	G	G	T	T				S															T	T
Template Predicted Secondary structure																.															.								.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.			.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions