Job Description P0A877 Confidence 97.77% Date Thu Jan 5 11:07:06 GMT 2012 Rank 228 Aligned Residues 163 % Identity 15% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	.	.	.	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P
Query Conservation																																					.	.	.
Alig confidence																					.	.															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	E	M	I	A	R	L	R	H	S	T	P	G	V	M	L	I	.	.	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	L	V	S	R
Template Known Secondary structure		G										T			T	T					.	.			S	S		T	T		S	S																T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		948	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.			.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.																							.	.	1000	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	.	.	.	.	.	.	.	.	.	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	.	.	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I
Query Conservation																															.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		S	G	I	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	W	E	M	G	L	S	E	V	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A
Template Known Secondary structure		T	T											T	T		S							T	T				S	S									S																		T	T		T	T	T	S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																										.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	G	A	E	E	F	G	I	G	T	A	S	L	I	A	M	G	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	C	V	Q	D	D	K	L	R	Q	K	F	V	G	T	P	E	K	V	V	N	L	F	T	F	L	A	E	E	V	R	E	I	L
Template Known Secondary structure			T	T		S												T	T							G	G	G	T			T	T	S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions