Job Description P0A877 Confidence 99.26% Date Thu Jan 5 11:07:06 GMT 2012 Rank 90 Aligned Residues 195 % Identity 17% Template c2rduA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyacid oxidase 1; PDBTitle: crystal structure of human glycolate oxidase in complex with2 glyoxylate Resolution 1.65 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	E	V	A	E	A	G	P	E	A	L	R	W	L	Q	L	Y	I	Y	K	D	R	E	V	T	K	K	L	V	R	Q	A	E	K	M	G	Y	K	A	I	F	V	T	V	D	T	P	Y	L	G	N	R	L	D	D	V	R	N	R	F	K	L	P	P	Q	L	R	M	K	N	F	E	T	S	T	L	S	F	S
Template Known Secondary structure										T	T	S									B	S	S														T	T									S		S	S											T					T	T				T	T		S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
				56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V
Query Conservation		.	.
Alig confidence		.	.																							.	.	.	.												.													.	.	.	.	.	.	.																			.	.	.
Template Conservation																										.	.	.	.												.													.	.	.	.	.	.	.																			.	.	.
Template Sequence		P	E	E	N	F	G	D	D	S	G	L	A	A	Y	V	A	K	A	I	D	P	S	I	S	.	.	.	.	W	E	D	I	K	W	L	R	R	L	T	.	S	L	P	I	V	A	K	G	I	L	R	G	.	.	.	.	.	.	.	D	D	A	R	E	A	V	K	H	G	L	N	G	I	L	V	S	N	.	.	.
Template Known Secondary structure		T	T	S				S	S											B		T	T			.	.	.	.												.		S									S		.	.	.	.	.	.	.									T	T									.	.	.
Template Predicted Secondary structure																										.	.	.	.												.													.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	.	.	A	A	P	P	L	Q	G
Query Conservation																																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	A	R	Q	L	D	G	V	P	A	T	I	D	V	L	P	E	I	V	E	A	V	E	G	K	V	E	V	F	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	S	S	T	T																T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A	A	T	R
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		G	G	V	R	K	G	T	D	V	L	K	A	L	A	L	G	A	K	A	V	F	V	G	R	P	I	V	W	G	L	A	F	Q	.	.	G	E	K	G	V	Q	D	V	L	E	I	L	K	E	E	F	R	L	A	M	A
Template Known Secondary structure		S	S			S										T	T		S					S											.	.
Template Predicted Secondary structure																																			.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions