Job Description P0A877 Confidence 97.19% Date Thu Jan 5 11:07:06 GMT 2012 Rank 289 Aligned Residues 218 % Identity 22% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																					.	.																																																						.	.	.	.	.	.
Query SS confidence																					.	.																																																						.	.	.	.	.	.
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	.	.	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	.	.	.	.	.	.
Query Conservation																					.	.																																																						.	.	.	.	.	.
Alig confidence																					.	.					.	.	.	.	.	.	.	.	.																.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		R	T	Y	D	I	A	R	I	A	G	T	Y	S	H	A	L	P	N	L	L	S	L	E	C	W	.	.	.	.	.	.	.	.	.	G	G	A	T	F	D	V	S	M	R	F	L	T	E	D	.	.	.	.	.	P	W	E	R	L	A	L	I	R	E	G	A	P	N	L	L	L	Q	M	L	L	R	G	A	N	G
Template Known Secondary structure																		T	T		S						.	.	.	.	.	.	.	.	.		T	T													.	.	.	.	.													T	T	S								T	T	T	B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.										.	.	.	.	.	590	.	.	.	.	.	.	.	.	.						600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.												.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	.	.	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	.	.	.	.	.	.	.	.	.	.	.	A	D	D	D	L	L	R	Q	I	A
Query Conservation																																		.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	Y	T	N	Y	P	D	N	V	V	K	Y	F	V	R	Q	A	A	K	G	G	I	D	L	F	R	V	F	D	C	L	N	W	V	E	N	M	R	V	S	M	D	A	I	A	E	E	N	K	L	C	E	A	A	I	C	Y	T	G	D	I	L	N	S	A	R	P	K	Y	D	L	K	Y	Y	T	N	L	A	V
Template Known Secondary structure		T		S	S																		T									T	T			G	G	G	G										T	T											S		T	T		T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	G	R	G	Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	.	.	.	.	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																														.	.	.	.					.																				.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																						.
Template Sequence		E	L	E	K	A	G	A	H	I	I	A	.	.	.	V	D	M	A	G	L	L	K	P	A	A	A	K	V	L	F	K	A	L	R	E	A	T	G	L	P	I	H	F	H	T	H	D	T	S	G	I	.	A	A	A	T	V	L	A	A	V	E	A	G	V	D	A	V	D	A	A	M	D	A	L	S	G	N	T	S
Template Known Secondary structure						T	T		S				.	.	.			T	T																				S	S								B	T	T	S		.											T	T		S					B		G	G	G		S	B	T	S
Template Predicted Secondary structure													.	.	.																																						.
Template SS confidence
		706	.	.	.	710	.	.	.	.	.	.				.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.		.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
						235	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.																.	.	.
Query SS confidence		.	.	.	.																.	.	.
Query Sequence		.	.	.	.	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	.	.	.	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A
Query Conservation		.	.	.	.																.	.	.
Alig confidence		.	.	.	.																.	.	.
Template Conservation
Template Sequence		Q	P	C	L	G	S	I	V	E	A	L	S	G	S	E	R	D	P	G	L	D	P	A	W	I	R	R	I	S	F	Y	W	E	A	V	R	N
Template Known Secondary structure				B									T	T	S	T	T																					G
Template Predicted Secondary structure
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions