Return to main results Retrieve Phyre Job Id

Job DescriptionP0A877
Confidence98.36%DateThu Jan 5 11:07:06 GMT 2012
Rank169Aligned Residues213
% Identity15%Templatec2qcnA_
PDB info PDB header:lyaseChain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  ERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQC
Query Conservation   

       
      

 

  
 
               
 
 









 



 
  
   

  
      
Alig confidence 


















..




















.














......................
Template Conservation        
  
   
 
 

..



     


 

  
   .
   


  
    
......................
Template Sequence  HPVASKLLRLMQKKETNLC. . LSADVSLARELLQLADALGPS. ICMLKTHVDILNDFT. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
T

..


S
GGG.
S
GGG
TT

......................
Template Predicted Secondary structure 





..






.




......................
Template SS confidence 















































































   237..240.........250..... ....260.........270...... ...280.........290.
 
   82.......90.........100.........110.........120 .........130.. .......140.........150...
Predicted Secondary structure 










.......







.



Query SS confidence 






































. . . . . . .











.




















Query Sequence  FEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEK. . . . . . . VGVDSVLVADVP. VEESAPFRQAALRHNVAPIFI
Query Conservation     
  

      




 
 
     
 
 
   
  .......

 




 


.  
           

  
  
Alig confidence 























...











.......











.




















Template Conservation     
  
          





 ... 





             


 



   
   
             
 

Template Sequence  LDVMKELITLAKCHEFLIFEDRKF. . . ADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI
Template Known Secondary structure  T
...
S

TTT
GGGT
SSTT
TTTTT
Template Predicted Secondary structure 





...

















Template SS confidence 















































































   292.......300.........310..... ....320.........330.........340.........350.........360........
 
   154.....160 .........170.........180.........190.........200.........210.....
Predicted Secondary structure 




.........





















.........
Query SS confidence 






. . . . . . . . .






















































. . . . . . . . .
Query Sequence  CPPNADD. . . . . . . . . DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGIS. . . . . . . . .
Query Conservation 


 
  .........  
      
 
 

     
 

            
  

     

 




 .........
Alig confidence 






.........



















...................















.........
Template Conservation 
 

                

        
 
   ...................           




        
Template Sequence  AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGS. . . . . . . . . . . . . . . . . . . RVSMKPEFLHLTPGVQLEAGGDNLG
Template Known Secondary structure 


SSTT



TTTTTT
SS...................




TTS
SB
SSS
B
TTS
Template Predicted Secondary structure 










...................




















Template SS confidence 















































































   369370.........380.........390.........400.... .....410.........420.........
 
   216...220.... .....230.........240.........250........ .260......
Predicted Secondary structure  .
.








.
Query SS confidence  .








.

































.







Query Sequence  . APDQVKAAI. DAGAAGAISGSAIVKIIEQHINEPEKMLAALKVF. VQPMKAAT
Query Conservation  .
 
 
    .  










 
               
   .   

   
Alig confidence  .








.













.....














.







Template Conservation   
  

  

   


 




 
 ..... 
 

  

   
   
 
     
Template Sequence  QQYNSPQEVIGKRGSDIIIVGRGII. . . . . SAADRLEAAEMYRKAAWEAYLSRL
Template Known Secondary structure 
B
B
TTS

SS.....TSS
Template Predicted Secondary structure 










.....



Template SS confidence 





















































   430.........440.........450.... .....460.........470........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions