Return to main results Retrieve Phyre Job Id

Job DescriptionP0A877
Confidence96.24%DateThu Jan 5 11:07:06 GMT 2012
Rank345Aligned Residues140
% Identity14%Templatec2p88E_
PDB info PDB header:lyaseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  RKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHP
Query Conservation       

 

  
 
               
 
 









 



 
  
   

  
         
  

    
Alig confidence 






































......................


















Template Conservation                         
      
    


 ......................
     
   
  

   
Template Sequence  RYHEEFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKV. . . . . . . . . . . . . . . . . . . . . . GTNVKEDVKRIEAVRERVG
Template Known Secondary structure 


S



S

TTT


......................
S
TT
Template Predicted Secondary structure 















......................




Template SS confidence 















































































   126...130.........140.........150.........160.... .....170.........180...
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGY
Query Conservation    




 
 
     
 
 
   
  

 




 


  
           

  
  


 
    
      
 
 
Alig confidence 

.










.......................




















......................
Template Conservation    .  
 



   .......................     
      
    
  
......................
Template Sequence  ND. IAIRVDVNQGW. . . . . . . . . . . . . . . . . . . . . . . KNSANTLTALRSLGHLNIDWI. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS.S
TTTT.......................BSTSTTTT
S
......................
Template Predicted Secondary structure 

.





.......................




......................
Template SS confidence 















































































   184. ....190...... ...200.........210.......
 
   174.....180.........190.........200.........210.........220....... ..230...
Predicted Secondary structure 





















.

Query SS confidence 





















































.





Query Sequence  TYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAG. AAGAIS
Query Conservation 

     
 

            
  

     

 




 
 
 
      
.





Alig confidence  ............









































.





Template Conservation  ............


    
      
     



 

           
     
 
  
Template Sequence  . . . . . . . . . . . . EQPVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNI
Template Known Secondary structure  ............

B
TT
T

S
STT

ST

S
Template Predicted Secondary structure  ............





















Template SS confidence 




























































   218.220.........230.........240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions