Job Description P0A877 Confidence 98.38% Date Thu Jan 5 11:07:06 GMT 2012 Rank 168 Aligned Residues 216 % Identity 21% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	.	.	.	.	.	.	.	.	.	G	G	A	T	F	D	S	C	I	R	F	L	G	E	.	.	.	.	.	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G
Template Known Secondary structure							T	T	T						T	S			S						.	.	.	.	.	.	.	.	.		T	T									T			.	.	.	.	.														T	T	S								G	G	G	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		109	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure				.	.	.	.	.	.																							.	.																												.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.																							.	.																												.	.	.	.	.	.	.	.
Query Sequence		K	G	.	.	.	.	.	.	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	.	.	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	.	.	.	.	.	.	.	.	D	D	L	L	R	Q	I	A	S	Y	G	R	G
Query Conservation				.	.	.	.	.	.																							.	.																												.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.																							.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	H	Y	A	D	D	V	V	D	T	F	V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D
Template Known Secondary structure		S	S																		T									T	T																	T													T	T																T	T		S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.														.
Predicted Secondary structure																																								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	Y	L	L	S	R	A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	.	.	.	.	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.																														.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																																						.
Template Sequence		S	I	A	L	.	.	.	.	.	K	D	M	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	.	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	H	P	A	T	E
Template Known Secondary structure						.	.	.	.	.			S	S	S																		S		S									T	T	S		.											T	T		S					B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure						.	.	.	.	.																																						.
Template SS confidence
		174	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		A	I	V	K	I	I	E	Q	H	I	N	E	P	.	.	.	E	K	M	L	A	A	L	K	V	F	V	Q	P	M	K	A
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		S	L	V	A	T	L	Q	G	T	G	Y	D	T	G	L	D	I	A	K	L	E	Q	I	A	A	Y	F	R	D	V	R	K
Template Known Secondary structure								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions